Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
C1QTNF9BB2RNN3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
C1QTNF9BB2RNN3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1QTNF9BB2RNN3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1QTNF9BB2RNN3 CROCCP3-202ENST00000420820 1947 ntBASIC16.06■□□□□ 0.16
C1QTNF9BB2RNN3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.06■□□□□ 0.16
C1QTNF9BB2RNN3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 HMGA1P7-201ENST00000406908 502 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 AP005482.1-201ENST00000563722 1273 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 RN7SL219P-201ENST00000582872 296 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 AC027307.2-201ENST00000591252 911 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1QTNF9BB2RNN3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 ESPNP-201ENST00000270691 2015 ntBASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 MIR346-201ENST00000362234 95 ntBASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 ACTBP11-201ENST00000436287 1126 ntBASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 AC234783.1-201ENST00000441761 496 ntBASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 TTTY23B-201ENST00000442790 549 ntBASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 MIR6775-201ENST00000617557 69 ntBASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 AL109936.8-201ENST00000641772 604 ntBASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
C1QTNF9BB2RNN3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 BNIP3P42-201ENST00000454982 569 ntBASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 AC107918.2-201ENST00000530817 355 ntBASIC16.03■□□□□ 0.16
C1QTNF9BB2RNN3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms