Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 AC117489.1-201ENST00000625169 3217 ntBASIC13.2□□□□□ -0.3
COLCA2A8K830 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.2□□□□□ -0.3
COLCA2A8K830 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.2□□□□□ -0.3
COLCA2A8K830 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.2□□□□□ -0.3
COLCA2A8K830 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.2□□□□□ -0.3
COLCA2A8K830 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 AL355472.2-201ENST00000422958 438 ntBASIC13.2□□□□□ -0.3
COLCA2A8K830 AC073210.2-201ENST00000430369 194 ntBASIC13.2□□□□□ -0.3
COLCA2A8K830 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 AL589743.5-201ENST00000616611 1050 ntBASIC13.2□□□□□ -0.3
COLCA2A8K830 AL035685.1-201ENST00000636663 812 ntBASIC13.2□□□□□ -0.3
COLCA2A8K830 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.2□□□□□ -0.3
COLCA2A8K830 KRT8P11-201ENST00000409686 1436 ntBASIC13.2□□□□□ -0.3
COLCA2A8K830 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.2□□□□□ -0.3
COLCA2A8K830 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.2□□□□□ -0.3
COLCA2A8K830 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
COLCA2A8K830 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
COLCA2A8K830 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.19□□□□□ -0.3
COLCA2A8K830 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.19□□□□□ -0.3
COLCA2A8K830 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.19□□□□□ -0.3
COLCA2A8K830 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.19□□□□□ -0.3
COLCA2A8K830 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.19□□□□□ -0.3
COLCA2A8K830 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.19□□□□□ -0.3
COLCA2A8K830 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.19□□□□□ -0.3
COLCA2A8K830 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.19□□□□□ -0.3
COLCA2A8K830 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
COLCA2A8K830 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
COLCA2A8K830 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.19□□□□□ -0.3
COLCA2A8K830 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.19□□□□□ -0.3
COLCA2A8K830 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
COLCA2A8K830 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.19□□□□□ -0.3
COLCA2A8K830 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.19□□□□□ -0.3
COLCA2A8K830 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.19□□□□□ -0.3
COLCA2A8K830 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 PRAL-201ENST00000624952 3286 ntBASIC13.19□□□□□ -0.3
COLCA2A8K830 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COLCA2A8K830 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.18□□□□□ -0.3
COLCA2A8K830 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.18□□□□□ -0.3
COLCA2A8K830 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COLCA2A8K830 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms