Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 FAM58CP-201ENST00000435741 640 ntBASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TBC1D3FA6NER0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 AC007613.1-201ENST00000572811 2597 ntBASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 AC087163.2-201ENST00000457299 853 ntBASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 KRT18P28-201ENST00000453838 1332 ntBASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 AC129492.6-201ENST00000611383 1305 ntBASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TBC1D3FA6NER0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 AC133963.1-201ENST00000504166 1679 ntBASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 CNN2P11-201ENST00000429351 262 ntBASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 AL031432.2-201ENST00000566714 459 ntBASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 AL928711.1-201ENST00000570165 459 ntBASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms