Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 BX005266.1-201ENST00000473402 457 ntBASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 KRT18P56-201ENST00000507275 550 ntBASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 PKD1P1-201ENST00000458669 6805 ntBASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 MTDHP3-201ENST00000594186 672 ntBASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 AL121761.2-201ENST00000598007 1648 ntBASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 AC097637.2-201ENST00000624096 1997 ntBASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC162PA2VCL2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 RBM17P3-201ENST00000417687 1192 ntBASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 NKAPP1-205ENST00000585790 367 ntBASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC162PA2VCL2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms