Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC196A0A1B0GTZ2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC196A0A1B0GTZ2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 RPS2P28-201ENST00000314255 741 ntBASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 KRT18P67-201ENST00000432816 1264 ntBASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 OR7E14P-202ENST00000530490 1290 ntBASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC196A0A1B0GTZ2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 AC079781.3-201ENST00000449110 356 ntBASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 AC018712.1-201ENST00000455767 687 ntBASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 AL160237.2-201ENST00000556165 472 ntBASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 AC106820.2-201ENST00000563775 3264 ntBASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20■□□□□ 0.79
CCDC196A0A1B0GTZ2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC196A0A1B0GTZ2 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms