Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV5-4A0A0C4DH59 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 PI4KAP1-204ENST00000612579 1703 ntBASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 GGTLC5P-201ENST00000617623 998 ntBASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC117500.6-201ENST00000624871 588 ntBASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC105020.1-201ENST00000435356 2205 ntBASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 TUBB8P12-201ENST00000308911 1335 ntBASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 TUBB7P-202ENST00000428444 1305 ntBASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 TUBB8P7-204ENST00000567960 1332 ntBASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV5-4A0A0C4DH59 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV5-4A0A0C4DH59 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV5-4A0A0C4DH59 AC002310.6-201ENST00000624451 1377 ntBASIC16.89■□□□□ 0.3
TRBV5-4A0A0C4DH59 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TRBV5-4A0A0C4DH59 PRORSD1P-202ENST00000563365 2154 ntBASIC16.89■□□□□ 0.3
TRBV5-4A0A0C4DH59 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
TRBV5-4A0A0C4DH59 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 AC116407.3-201ENST00000623905 1129 ntBASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 AD000864.1-201ENST00000624076 2295 ntBASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV5-4A0A0C4DH59 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 SLC25A6P2-201ENST00000497974 877 ntBASIC16.88■□□□□ 0.29
TRBV5-4A0A0C4DH59 IGHV3-22-201ENST00000520721 359 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms