Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC092329.2-201ENST00000598402 547 ntBASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 KRT8P10-201ENST00000450021 1447 ntBASIC12.54□□□□□ -0.4
TRGV1A0A0A0MS02 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 AP001094.4-201ENST00000579008 2176 ntBASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 AC011467.2-201ENST00000598425 242 ntBASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 AC099336.1-202ENST00000602961 463 ntBASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms