Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC187A0A096LP49 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 REXO1L11P-201ENST00000620964 1927 ntBASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 INGX-202ENST00000489074 768 ntBASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 AL512356.2-201ENST00000546955 174 ntBASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 AP001059.3-201ENST00000619053 235 ntBASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 LINC01451-201ENST00000623792 534 ntBASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC187A0A096LP49 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 BASP1P1-201ENST00000430708 665 ntBASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AC190387.1-201ENST00000551683 408 ntBASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AC243562.1-201ENST00000560672 389 ntBASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AL390955.2-201ENST00000603032 514 ntBASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC187A0A096LP49 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 AC244107.1-201ENST00000442033 332 ntBASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 AC051619.7-201ENST00000568314 623 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms