Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA4Q9Y5G9 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHGA4Q9Y5G9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA4Q9Y5G9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGA4Q9Y5G9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHGA4Q9Y5G9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHGA4Q9Y5G9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA4Q9Y5G9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PCDHGA4Q9Y5G9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PCDHGA4Q9Y5G9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHGA4Q9Y5G9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA4Q9Y5G9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 AL592293.1-201ENST00000502889 1188 ntBASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGA4Q9Y5G9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA4Q9Y5G9 AC009831.1-201ENST00000580420 1582 ntBASIC23.62■■□□□ 1.37
PCDHGA4Q9Y5G9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA4Q9Y5G9 AC133552.2-201ENST00000619106 1032 ntBASIC23.62■■□□□ 1.37
PCDHGA4Q9Y5G9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHGA4Q9Y5G9 AL121749.1-202ENST00000609313 2153 ntBASIC23.62■■□□□ 1.37
PCDHGA4Q9Y5G9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PCDHGA4Q9Y5G9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA4Q9Y5G9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 AL035685.1-201ENST00000636663 812 ntBASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDHGA4Q9Y5G9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA4Q9Y5G9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA4Q9Y5G9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PCDHGA4Q9Y5G9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA4Q9Y5G9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA4Q9Y5G9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA4Q9Y5G9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PCDHGA4Q9Y5G9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHGA4Q9Y5G9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA4Q9Y5G9 AL451085.2-201ENST00000605085 799 ntBASIC23.57■■□□□ 1.36
PCDHGA4Q9Y5G9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA4Q9Y5G9 AC142472.1-201ENST00000612013 1741 ntBASIC23.56■■□□□ 1.36
PCDHGA4Q9Y5G9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA4Q9Y5G9 AP004609.3-201ENST00000610705 1884 ntBASIC23.56■■□□□ 1.36
PCDHGA4Q9Y5G9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA4Q9Y5G9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA4Q9Y5G9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.56■■□□□ 1.36
PCDHGA4Q9Y5G9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGA4Q9Y5G9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA4Q9Y5G9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PCDHGA4Q9Y5G9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA4Q9Y5G9 AL359504.2-201ENST00000605506 1601 ntBASIC23.55■■□□□ 1.36
PCDHGA4Q9Y5G9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA4Q9Y5G9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA4Q9Y5G9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA4Q9Y5G9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA4Q9Y5G9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHGA4Q9Y5G9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA4Q9Y5G9 SMPD5-203ENST00000639008 1464 ntBASIC23.52■■□□□ 1.36
PCDHGA4Q9Y5G9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PCDHGA4Q9Y5G9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA4Q9Y5G9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGA4Q9Y5G9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA4Q9Y5G9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGA4Q9Y5G9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA4Q9Y5G9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHGA4Q9Y5G9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA4Q9Y5G9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
PCDHGA4Q9Y5G9 AC025884.2-201ENST00000553429 711 ntBASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms