Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GAR1Q9NY12 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.4■□□□□ 0.7
GAR1Q9NY12 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.4■□□□□ 0.7
GAR1Q9NY12 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
GAR1Q9NY12 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAR1Q9NY12 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GAR1Q9NY12 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
GAR1Q9NY12 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAR1Q9NY12 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GAR1Q9NY12 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.39■□□□□ 0.69
GAR1Q9NY12 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.39■□□□□ 0.69
GAR1Q9NY12 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GAR1Q9NY12 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAR1Q9NY12 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAR1Q9NY12 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GAR1Q9NY12 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GAR1Q9NY12 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAR1Q9NY12 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GAR1Q9NY12 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAR1Q9NY12 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.37■□□□□ 0.69
GAR1Q9NY12 DUX4L11-201ENST00000611504 1267 ntBASIC19.37■□□□□ 0.69
GAR1Q9NY12 DUX4L12-201ENST00000614593 1267 ntBASIC19.37■□□□□ 0.69
GAR1Q9NY12 DUX4L14-201ENST00000621227 1267 ntBASIC19.37■□□□□ 0.69
GAR1Q9NY12 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAR1Q9NY12 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAR1Q9NY12 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAR1Q9NY12 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAR1Q9NY12 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GAR1Q9NY12 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAR1Q9NY12 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAR1Q9NY12 MIR639-201ENST00000384974 98 ntBASIC19.34■□□□□ 0.69
GAR1Q9NY12 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.34■□□□□ 0.69
GAR1Q9NY12 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.34■□□□□ 0.69
GAR1Q9NY12 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAR1Q9NY12 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
GAR1Q9NY12 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAR1Q9NY12 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAR1Q9NY12 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAR1Q9NY12 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAR1Q9NY12 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAR1Q9NY12 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAR1Q9NY12 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAR1Q9NY12 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAR1Q9NY12 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GAR1Q9NY12 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.32■□□□□ 0.68
GAR1Q9NY12 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAR1Q9NY12 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAR1Q9NY12 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GAR1Q9NY12 AC145676.1-201ENST00000514988 2004 ntBASIC19.31■□□□□ 0.68
GAR1Q9NY12 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GAR1Q9NY12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GAR1Q9NY12 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.3■□□□□ 0.68
GAR1Q9NY12 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GAR1Q9NY12 WHAMMP3-201ENST00000611636 1609 ntBASIC19.29■□□□□ 0.68
GAR1Q9NY12 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GAR1Q9NY12 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.29■□□□□ 0.68
GAR1Q9NY12 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GAR1Q9NY12 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.29■□□□□ 0.68
GAR1Q9NY12 AC016575.1-201ENST00000607026 382 ntBASIC19.29■□□□□ 0.68
GAR1Q9NY12 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GAR1Q9NY12 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.29■□□□□ 0.68
GAR1Q9NY12 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.29■□□□□ 0.68
GAR1Q9NY12 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GAR1Q9NY12 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GAR1Q9NY12 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAR1Q9NY12 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAR1Q9NY12 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.28■□□□□ 0.68
GAR1Q9NY12 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.28■□□□□ 0.68
GAR1Q9NY12 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAR1Q9NY12 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GAR1Q9NY12 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.28■□□□□ 0.68
GAR1Q9NY12 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAR1Q9NY12 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
GAR1Q9NY12 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.28■□□□□ 0.68
GAR1Q9NY12 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAR1Q9NY12 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.28■□□□□ 0.68
GAR1Q9NY12 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GAR1Q9NY12 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GAR1Q9NY12 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.27■□□□□ 0.68
GAR1Q9NY12 AC148477.6-201ENST00000623746 465 ntBASIC19.27■□□□□ 0.68
GAR1Q9NY12 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GAR1Q9NY12 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GAR1Q9NY12 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GAR1Q9NY12 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.26■□□□□ 0.67
GAR1Q9NY12 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms