Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SOX17Q9H6I2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SOX17Q9H6I2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SOX17Q9H6I2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.31■■□□□ 1.32
SOX17Q9H6I2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SOX17Q9H6I2 AC012354.3-201ENST00000623734 483 ntBASIC23.31■■□□□ 1.32
SOX17Q9H6I2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SOX17Q9H6I2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.31■■□□□ 1.32
SOX17Q9H6I2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 AC145676.1-201ENST00000514988 2004 ntBASIC23.3■■□□□ 1.32
SOX17Q9H6I2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
SOX17Q9H6I2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SOX17Q9H6I2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX17Q9H6I2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SOX17Q9H6I2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX17Q9H6I2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SOX17Q9H6I2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX17Q9H6I2 WHAMMP3-201ENST00000611636 1609 ntBASIC23.27■■□□□ 1.32
SOX17Q9H6I2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX17Q9H6I2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX17Q9H6I2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.27■■□□□ 1.32
SOX17Q9H6I2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX17Q9H6I2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SOX17Q9H6I2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.27■■□□□ 1.31
SOX17Q9H6I2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 AC025884.2-201ENST00000553429 711 ntBASIC23.26■■□□□ 1.31
SOX17Q9H6I2 AC093323.1-202ENST00000635031 2045 ntBASIC23.26■■□□□ 1.31
SOX17Q9H6I2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.26■■□□□ 1.31
SOX17Q9H6I2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOX17Q9H6I2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.25■■□□□ 1.31
SOX17Q9H6I2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SOX17Q9H6I2 KRT18P60-201ENST00000312876 1297 ntBASIC23.25■■□□□ 1.31
SOX17Q9H6I2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.25■■□□□ 1.31
SOX17Q9H6I2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SOX17Q9H6I2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.25■■□□□ 1.31
SOX17Q9H6I2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.24■■□□□ 1.31
SOX17Q9H6I2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.24■■□□□ 1.31
SOX17Q9H6I2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SOX17Q9H6I2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SOX17Q9H6I2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX17Q9H6I2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SOX17Q9H6I2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SOX17Q9H6I2 AL033527.3-201ENST00000566366 1196 ntBASIC23.23■■□□□ 1.31
SOX17Q9H6I2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.23■■□□□ 1.31
SOX17Q9H6I2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX17Q9H6I2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SOX17Q9H6I2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SOX17Q9H6I2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SOX17Q9H6I2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SOX17Q9H6I2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SOX17Q9H6I2 AC133552.2-201ENST00000619106 1032 ntBASIC23.22■■□□□ 1.31
SOX17Q9H6I2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.22■■□□□ 1.31
SOX17Q9H6I2 AC009831.1-201ENST00000580420 1582 ntBASIC23.22■■□□□ 1.31
SOX17Q9H6I2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SOX17Q9H6I2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SOX17Q9H6I2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOX17Q9H6I2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOX17Q9H6I2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SOX17Q9H6I2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOX17Q9H6I2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SOX17Q9H6I2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SOX17Q9H6I2 AL359504.2-201ENST00000605506 1601 ntBASIC23.2■■□□□ 1.3
SOX17Q9H6I2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SOX17Q9H6I2 RP9P-202ENST00000450133 1212 ntBASIC23.2■■□□□ 1.3
SOX17Q9H6I2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SOX17Q9H6I2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 AL592293.1-201ENST00000502889 1188 ntBASIC23.19■■□□□ 1.3
SOX17Q9H6I2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SOX17Q9H6I2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.18■■□□□ 1.3
SOX17Q9H6I2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.18■■□□□ 1.3
SOX17Q9H6I2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SOX17Q9H6I2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.18■■□□□ 1.3
SOX17Q9H6I2 AC093536.1-201ENST00000569153 554 ntBASIC23.18■■□□□ 1.3
SOX17Q9H6I2 AC026202.3-201ENST00000600805 1127 ntBASIC23.18■■□□□ 1.3
SOX17Q9H6I2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms