Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 HLA-V-202ENST00000446817 847 ntBASIC18.82■□□□□ 0.6
TRGV9Q99603 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.82■□□□□ 0.6
TRGV9Q99603 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.82■□□□□ 0.6
TRGV9Q99603 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV9Q99603 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.81■□□□□ 0.6
TRGV9Q99603 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV9Q99603 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV9Q99603 AC022211.4-201ENST00000625094 2161 ntBASIC18.81■□□□□ 0.6
TRGV9Q99603 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV9Q99603 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV9Q99603 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.8■□□□□ 0.6
TRGV9Q99603 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TRGV9Q99603 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.8■□□□□ 0.6
TRGV9Q99603 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.8■□□□□ 0.6
TRGV9Q99603 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV9Q99603 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV9Q99603 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRGV9Q99603 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV9Q99603 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV9Q99603 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV9Q99603 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV9Q99603 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV9Q99603 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV9Q99603 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.79■□□□□ 0.6
TRGV9Q99603 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRGV9Q99603 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV9Q99603 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV9Q99603 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV9Q99603 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV9Q99603 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRGV9Q99603 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV9Q99603 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV9Q99603 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV9Q99603 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV9Q99603 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV9Q99603 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRGV9Q99603 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV9Q99603 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV9Q99603 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV9Q99603 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV9Q99603 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.77■□□□□ 0.6
TRGV9Q99603 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV9Q99603 AC138932.3-201ENST00000567634 1902 ntBASIC18.76■□□□□ 0.59
TRGV9Q99603 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV9Q99603 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV9Q99603 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRGV9Q99603 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.76■□□□□ 0.59
TRGV9Q99603 AC126177.7-201ENST00000547904 679 ntBASIC18.76■□□□□ 0.59
TRGV9Q99603 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV9Q99603 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV9Q99603 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV9Q99603 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.75■□□□□ 0.59
TRGV9Q99603 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
TRGV9Q99603 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV9Q99603 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV9Q99603 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.75■□□□□ 0.59
TRGV9Q99603 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRGV9Q99603 ZNRF2P2-203ENST00000454624 420 ntBASIC18.74■□□□□ 0.59
TRGV9Q99603 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.74■□□□□ 0.59
TRGV9Q99603 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV9Q99603 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV9Q99603 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV9Q99603 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.73■□□□□ 0.59
TRGV9Q99603 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV9Q99603 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV9Q99603 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.72■□□□□ 0.59
TRGV9Q99603 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV9Q99603 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRGV9Q99603 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.72■□□□□ 0.59
TRGV9Q99603 AL139125.2-201ENST00000623134 1869 ntBASIC18.72■□□□□ 0.59
TRGV9Q99603 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV9Q99603 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRGV9Q99603 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.72■□□□□ 0.59
TRGV9Q99603 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.72■□□□□ 0.59
TRGV9Q99603 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms