Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
NEK11Q8NG66 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NEK11Q8NG66 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NEK11Q8NG66 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK11Q8NG66 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK11Q8NG66 ABHD17AP4-201ENST00000411545 909 ntBASIC26.36■■□□□ 1.81
NEK11Q8NG66 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
NEK11Q8NG66 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK11Q8NG66 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NEK11Q8NG66 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
NEK11Q8NG66 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NEK11Q8NG66 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
NEK11Q8NG66 AL359504.2-201ENST00000605506 1601 ntBASIC26.35■■□□□ 1.81
NEK11Q8NG66 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK11Q8NG66 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK11Q8NG66 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
NEK11Q8NG66 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
NEK11Q8NG66 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NEK11Q8NG66 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.34■■□□□ 1.81
NEK11Q8NG66 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NEK11Q8NG66 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NEK11Q8NG66 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.33■■□□□ 1.81
NEK11Q8NG66 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NEK11Q8NG66 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.33■■□□□ 1.81
NEK11Q8NG66 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
NEK11Q8NG66 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NEK11Q8NG66 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NEK11Q8NG66 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.32■■□□□ 1.8
NEK11Q8NG66 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.32■■□□□ 1.8
NEK11Q8NG66 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NEK11Q8NG66 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.32■■□□□ 1.8
NEK11Q8NG66 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
NEK11Q8NG66 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NEK11Q8NG66 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.31■■□□□ 1.8
NEK11Q8NG66 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.3■■□□□ 1.8
NEK11Q8NG66 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
NEK11Q8NG66 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.3■■□□□ 1.8
NEK11Q8NG66 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
NEK11Q8NG66 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NEK11Q8NG66 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NEK11Q8NG66 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.29■■□□□ 1.8
NEK11Q8NG66 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK11Q8NG66 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NEK11Q8NG66 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
NEK11Q8NG66 MIR3648-2-201ENST00000581792 180 ntBASIC26.28■■□□□ 1.8
NEK11Q8NG66 MIR3648-1-201ENST00000615959 180 ntBASIC26.28■■□□□ 1.8
NEK11Q8NG66 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NEK11Q8NG66 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.28■■□□□ 1.8
NEK11Q8NG66 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NEK11Q8NG66 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
NEK11Q8NG66 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK11Q8NG66 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK11Q8NG66 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK11Q8NG66 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK11Q8NG66 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
NEK11Q8NG66 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NEK11Q8NG66 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK11Q8NG66 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NEK11Q8NG66 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
NEK11Q8NG66 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
NEK11Q8NG66 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.26■■□□□ 1.79
NEK11Q8NG66 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
NEK11Q8NG66 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK11Q8NG66 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NEK11Q8NG66 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK11Q8NG66 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK11Q8NG66 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK11Q8NG66 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NEK11Q8NG66 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NEK11Q8NG66 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.25■■□□□ 1.79
NEK11Q8NG66 AC126177.7-201ENST00000547904 679 ntBASIC26.25■■□□□ 1.79
NEK11Q8NG66 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
NEK11Q8NG66 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
NEK11Q8NG66 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK11Q8NG66 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
NEK11Q8NG66 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.24■■□□□ 1.79
NEK11Q8NG66 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
NEK11Q8NG66 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.24■■□□□ 1.79
NEK11Q8NG66 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
NEK11Q8NG66 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK11Q8NG66 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.23■■□□□ 1.79
NEK11Q8NG66 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NEK11Q8NG66 AC096887.2-201ENST00000623443 1957 ntBASIC26.22■■□□□ 1.79
NEK11Q8NG66 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.22■■□□□ 1.79
NEK11Q8NG66 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.22■■□□□ 1.79
NEK11Q8NG66 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NEK11Q8NG66 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
NEK11Q8NG66 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK11Q8NG66 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK11Q8NG66 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.21■■□□□ 1.79
NEK11Q8NG66 AC016575.1-201ENST00000607026 382 ntBASIC26.21■■□□□ 1.79
NEK11Q8NG66 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
NEK11Q8NG66 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
NEK11Q8NG66 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
NEK11Q8NG66 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NEK11Q8NG66 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
NEK11Q8NG66 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NEK11Q8NG66 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NEK11Q8NG66 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NEK11Q8NG66 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms