Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TTC39CQ8N584 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.83■■□□□ 1.73
TTC39CQ8N584 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC39CQ8N584 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TTC39CQ8N584 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TTC39CQ8N584 AC092803.2-201ENST00000564287 1899 ntBASIC25.82■■□□□ 1.72
TTC39CQ8N584 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.82■■□□□ 1.72
TTC39CQ8N584 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TTC39CQ8N584 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TTC39CQ8N584 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.81■■□□□ 1.72
TTC39CQ8N584 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TTC39CQ8N584 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
TTC39CQ8N584 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.81■■□□□ 1.72
TTC39CQ8N584 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.81■■□□□ 1.72
TTC39CQ8N584 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TTC39CQ8N584 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TTC39CQ8N584 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TTC39CQ8N584 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TTC39CQ8N584 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.8■■□□□ 1.72
TTC39CQ8N584 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
TTC39CQ8N584 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.8■■□□□ 1.72
TTC39CQ8N584 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
TTC39CQ8N584 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC39CQ8N584 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC39CQ8N584 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TTC39CQ8N584 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC39CQ8N584 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.79■■□□□ 1.72
TTC39CQ8N584 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC39CQ8N584 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39CQ8N584 KRT18P10-201ENST00000388836 1287 ntBASIC25.78■■□□□ 1.72
TTC39CQ8N584 NTF6A-201ENST00000591175 560 ntBASIC25.78■■□□□ 1.72
TTC39CQ8N584 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC39CQ8N584 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.78■■□□□ 1.72
TTC39CQ8N584 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TTC39CQ8N584 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TTC39CQ8N584 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TTC39CQ8N584 U85056.1-201ENST00000616429 682 ntBASIC25.77■■□□□ 1.72
TTC39CQ8N584 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TTC39CQ8N584 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.77■■□□□ 1.72
TTC39CQ8N584 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
TTC39CQ8N584 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
TTC39CQ8N584 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TTC39CQ8N584 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TTC39CQ8N584 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TTC39CQ8N584 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.75■■□□□ 1.71
TTC39CQ8N584 AL592293.1-201ENST00000502889 1188 ntBASIC25.75■■□□□ 1.71
TTC39CQ8N584 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
TTC39CQ8N584 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.75■■□□□ 1.71
TTC39CQ8N584 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TTC39CQ8N584 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.74■■□□□ 1.71
TTC39CQ8N584 AC145676.1-201ENST00000514988 2004 ntBASIC25.74■■□□□ 1.71
TTC39CQ8N584 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
TTC39CQ8N584 AC091060.1-201ENST00000623524 1766 ntBASIC25.74■■□□□ 1.71
TTC39CQ8N584 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.73■■□□□ 1.71
TTC39CQ8N584 DUSP8P4-201ENST00000399538 1761 ntBASIC25.73■■□□□ 1.71
TTC39CQ8N584 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TTC39CQ8N584 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
TTC39CQ8N584 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.73■■□□□ 1.71
TTC39CQ8N584 AC010501.1-201ENST00000606270 1962 ntBASIC25.73■■□□□ 1.71
TTC39CQ8N584 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC39CQ8N584 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.72■■□□□ 1.71
TTC39CQ8N584 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC39CQ8N584 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.72■■□□□ 1.71
TTC39CQ8N584 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
TTC39CQ8N584 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
TTC39CQ8N584 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TTC39CQ8N584 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC39CQ8N584 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.71■■□□□ 1.71
TTC39CQ8N584 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC39CQ8N584 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC39CQ8N584 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC39CQ8N584 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TTC39CQ8N584 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TTC39CQ8N584 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
TTC39CQ8N584 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.7■■□□□ 1.7
TTC39CQ8N584 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TTC39CQ8N584 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TTC39CQ8N584 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TTC39CQ8N584 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TTC39CQ8N584 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TTC39CQ8N584 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.7■■□□□ 1.7
TTC39CQ8N584 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TTC39CQ8N584 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
TTC39CQ8N584 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
TTC39CQ8N584 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
TTC39CQ8N584 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
TTC39CQ8N584 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.68■■□□□ 1.7
TTC39CQ8N584 KRT18P60-201ENST00000312876 1297 ntBASIC25.67■■□□□ 1.7
TTC39CQ8N584 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TTC39CQ8N584 AC018755.3-202ENST00000596210 929 ntBASIC25.67■■□□□ 1.7
TTC39CQ8N584 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.66■■□□□ 1.7
TTC39CQ8N584 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC39CQ8N584 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.66■■□□□ 1.7
TTC39CQ8N584 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC39CQ8N584 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TTC39CQ8N584 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TTC39CQ8N584 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39CQ8N584 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39CQ8N584 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39CQ8N584 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms