Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MIR219A2-201ENST00000608502 1504 ntBASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01561Q8N1V8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 AP003733.4-201ENST00000623785 1697 ntBASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01561Q8N1V8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 AC138932.3-201ENST00000567634 1902 ntBASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01561Q8N1V8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01561Q8N1V8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC01561Q8N1V8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01561Q8N1V8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01561Q8N1V8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC01561Q8N1V8 AL359258.2-201ENST00000564063 1566 ntBASIC16.11■□□□□ 0.17
LINC01561Q8N1V8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01561Q8N1V8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC01561Q8N1V8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC01561Q8N1V8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 AL359504.2-201ENST00000605506 1601 ntBASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC01561Q8N1V8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC01561Q8N1V8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC01561Q8N1V8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.08■□□□□ 0.17
LINC01561Q8N1V8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 AC126177.7-201ENST00000547904 679 ntBASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 AC097639.1-201ENST00000565519 1891 ntBASIC16.08■□□□□ 0.16
LINC01561Q8N1V8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms