Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
DHX40Q8IX18 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.91■■□□□ 1.9
DHX40Q8IX18 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.91■■□□□ 1.9
DHX40Q8IX18 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DHX40Q8IX18 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
DHX40Q8IX18 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
DHX40Q8IX18 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.9■■□□□ 1.9
DHX40Q8IX18 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
DHX40Q8IX18 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.9■■□□□ 1.9
DHX40Q8IX18 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
DHX40Q8IX18 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
DHX40Q8IX18 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
DHX40Q8IX18 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DHX40Q8IX18 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
DHX40Q8IX18 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DHX40Q8IX18 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.89■■□□□ 1.89
DHX40Q8IX18 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
DHX40Q8IX18 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.89■■□□□ 1.89
DHX40Q8IX18 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
DHX40Q8IX18 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
DHX40Q8IX18 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DHX40Q8IX18 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.87■■□□□ 1.89
DHX40Q8IX18 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
DHX40Q8IX18 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.87■■□□□ 1.89
DHX40Q8IX18 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DHX40Q8IX18 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
DHX40Q8IX18 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DHX40Q8IX18 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
DHX40Q8IX18 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DHX40Q8IX18 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DHX40Q8IX18 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DHX40Q8IX18 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DHX40Q8IX18 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DHX40Q8IX18 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
DHX40Q8IX18 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
DHX40Q8IX18 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.85■■□□□ 1.89
DHX40Q8IX18 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.85■■□□□ 1.89
DHX40Q8IX18 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.85■■□□□ 1.89
DHX40Q8IX18 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.85■■□□□ 1.89
DHX40Q8IX18 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.85■■□□□ 1.89
DHX40Q8IX18 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.85■■□□□ 1.89
DHX40Q8IX18 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DHX40Q8IX18 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
DHX40Q8IX18 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DHX40Q8IX18 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.84■■□□□ 1.89
DHX40Q8IX18 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.84■■□□□ 1.89
DHX40Q8IX18 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
DHX40Q8IX18 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.83■■□□□ 1.89
DHX40Q8IX18 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
DHX40Q8IX18 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
DHX40Q8IX18 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.82■■□□□ 1.88
DHX40Q8IX18 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
DHX40Q8IX18 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
DHX40Q8IX18 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.81■■□□□ 1.88
DHX40Q8IX18 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
DHX40Q8IX18 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
DHX40Q8IX18 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.81■■□□□ 1.88
DHX40Q8IX18 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.81■■□□□ 1.88
DHX40Q8IX18 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.81■■□□□ 1.88
DHX40Q8IX18 MIR219A2-201ENST00000608502 1504 ntBASIC26.8■■□□□ 1.88
DHX40Q8IX18 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.8■■□□□ 1.88
DHX40Q8IX18 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DHX40Q8IX18 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.8■■□□□ 1.88
DHX40Q8IX18 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.8■■□□□ 1.88
DHX40Q8IX18 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
DHX40Q8IX18 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DHX40Q8IX18 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DHX40Q8IX18 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
DHX40Q8IX18 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DHX40Q8IX18 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DHX40Q8IX18 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DHX40Q8IX18 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
DHX40Q8IX18 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
DHX40Q8IX18 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DHX40Q8IX18 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DHX40Q8IX18 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DHX40Q8IX18 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
DHX40Q8IX18 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
DHX40Q8IX18 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.77■■□□□ 1.88
DHX40Q8IX18 AL359504.2-201ENST00000605506 1601 ntBASIC26.76■■□□□ 1.87
DHX40Q8IX18 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DHX40Q8IX18 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DHX40Q8IX18 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DHX40Q8IX18 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DHX40Q8IX18 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
DHX40Q8IX18 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
DHX40Q8IX18 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
DHX40Q8IX18 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
DHX40Q8IX18 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
DHX40Q8IX18 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
DHX40Q8IX18 AC148477.6-201ENST00000623746 465 ntBASIC26.74■■□□□ 1.87
DHX40Q8IX18 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
DHX40Q8IX18 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms