Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC37.79■■■■□ 3.64
ABCA9Q8IUA7 AC137630.3-201ENST00000607245 391 ntBASIC37.79■■■■□ 3.64
ABCA9Q8IUA7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
ABCA9Q8IUA7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC37.79■■■■□ 3.64
ABCA9Q8IUA7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC37.79■■■■□ 3.64
ABCA9Q8IUA7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC37.78■■■■□ 3.64
ABCA9Q8IUA7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
ABCA9Q8IUA7 AC021242.3-201ENST00000607598 1377 ntBASIC37.77■■■■□ 3.64
ABCA9Q8IUA7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
ABCA9Q8IUA7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
ABCA9Q8IUA7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
ABCA9Q8IUA7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC37.77■■■■□ 3.64
ABCA9Q8IUA7 AL139393.2-201ENST00000608721 2025 ntBASIC37.76■■■■□ 3.64
ABCA9Q8IUA7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC37.76■■■■□ 3.64
ABCA9Q8IUA7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC37.76■■■■□ 3.64
ABCA9Q8IUA7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
ABCA9Q8IUA7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC37.76■■■■□ 3.64
ABCA9Q8IUA7 KRT18P24-201ENST00000344739 1156 ntBASIC37.76■■■■□ 3.63
ABCA9Q8IUA7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC37.75■■■■□ 3.63
ABCA9Q8IUA7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
ABCA9Q8IUA7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
ABCA9Q8IUA7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
ABCA9Q8IUA7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
ABCA9Q8IUA7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
ABCA9Q8IUA7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
ABCA9Q8IUA7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
ABCA9Q8IUA7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
ABCA9Q8IUA7 AC110285.6-201ENST00000617652 491 ntBASIC37.73■■■■□ 3.63
ABCA9Q8IUA7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
ABCA9Q8IUA7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC37.72■■■■□ 3.63
ABCA9Q8IUA7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC37.72■■■■□ 3.63
ABCA9Q8IUA7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC37.71■■■■□ 3.63
ABCA9Q8IUA7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC37.71■■■■□ 3.63
ABCA9Q8IUA7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC37.71■■■■□ 3.63
ABCA9Q8IUA7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC37.7■■■■□ 3.63
ABCA9Q8IUA7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC37.7■■■■□ 3.63
ABCA9Q8IUA7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC37.7■■■■□ 3.63
ABCA9Q8IUA7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC37.7■■■■□ 3.63
ABCA9Q8IUA7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC37.7■■■■□ 3.63
ABCA9Q8IUA7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC37.69■■■■□ 3.62
ABCA9Q8IUA7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
ABCA9Q8IUA7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC37.68■■■■□ 3.62
ABCA9Q8IUA7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC37.68■■■■□ 3.62
ABCA9Q8IUA7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC37.68■■■■□ 3.62
ABCA9Q8IUA7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
ABCA9Q8IUA7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
ABCA9Q8IUA7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC37.66■■■■□ 3.62
ABCA9Q8IUA7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC37.66■■■■□ 3.62
ABCA9Q8IUA7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
ABCA9Q8IUA7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC37.66■■■■□ 3.62
ABCA9Q8IUA7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC37.66■■■■□ 3.62
ABCA9Q8IUA7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC37.66■■■■□ 3.62
ABCA9Q8IUA7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC37.65■■■■□ 3.62
ABCA9Q8IUA7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC37.65■■■■□ 3.62
ABCA9Q8IUA7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC37.65■■■■□ 3.62
ABCA9Q8IUA7 AL117332.1-201ENST00000622628 974 ntBASIC37.65■■■■□ 3.62
ABCA9Q8IUA7 TSPY9P-201ENST00000440215 945 ntBASIC37.65■■■■□ 3.62
ABCA9Q8IUA7 TSPY11P-201ENST00000442607 1045 ntBASIC37.65■■■■□ 3.62
ABCA9Q8IUA7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC37.65■■■■□ 3.62
ABCA9Q8IUA7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC37.64■■■■□ 3.62
ABCA9Q8IUA7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC37.63■■■■□ 3.61
ABCA9Q8IUA7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC37.63■■■■□ 3.61
ABCA9Q8IUA7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC37.63■■■■□ 3.61
ABCA9Q8IUA7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC37.62■■■■□ 3.61
ABCA9Q8IUA7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC37.61■■■■□ 3.61
ABCA9Q8IUA7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC37.61■■■■□ 3.61
ABCA9Q8IUA7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
ABCA9Q8IUA7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC37.61■■■■□ 3.61
ABCA9Q8IUA7 AL136116.3-201ENST00000402907 1138 ntBASIC37.61■■■■□ 3.61
ABCA9Q8IUA7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
ABCA9Q8IUA7 SRR-208ENST00000576848 588 ntTSL 4 BASIC37.61■■■■□ 3.61
ABCA9Q8IUA7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
ABCA9Q8IUA7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
ABCA9Q8IUA7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC37.59■■■■□ 3.61
ABCA9Q8IUA7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC37.58■■■■□ 3.61
ABCA9Q8IUA7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC37.58■■■■□ 3.61
ABCA9Q8IUA7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
ABCA9Q8IUA7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC37.58■■■■□ 3.61
ABCA9Q8IUA7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
ABCA9Q8IUA7 MIR4281-201ENST00000580852 62 ntBASIC37.58■■■■□ 3.61
ABCA9Q8IUA7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC37.58■■■■□ 3.61
ABCA9Q8IUA7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC37.57■■■■□ 3.6
ABCA9Q8IUA7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC37.57■■■■□ 3.6
ABCA9Q8IUA7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC37.57■■■■□ 3.6
ABCA9Q8IUA7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC37.57■■■■□ 3.6
ABCA9Q8IUA7 AC092028.1-203ENST00000608262 953 ntBASIC37.57■■■■□ 3.6
ABCA9Q8IUA7 AC120024.1-201ENST00000562672 995 ntBASIC37.56■■■■□ 3.6
ABCA9Q8IUA7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC37.56■■■■□ 3.6
ABCA9Q8IUA7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC37.54■■■■□ 3.6
ABCA9Q8IUA7 KRT18P10-201ENST00000388836 1287 ntBASIC37.54■■■■□ 3.6
ABCA9Q8IUA7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC37.54■■■■□ 3.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms