Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.42■■□□□ 1.66
CPNE8Q86YQ8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.41■■□□□ 1.66
CPNE8Q86YQ8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.41■■□□□ 1.66
CPNE8Q86YQ8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CPNE8Q86YQ8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CPNE8Q86YQ8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.41■■□□□ 1.66
CPNE8Q86YQ8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CPNE8Q86YQ8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
CPNE8Q86YQ8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CPNE8Q86YQ8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CPNE8Q86YQ8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CPNE8Q86YQ8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CPNE8Q86YQ8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
CPNE8Q86YQ8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPNE8Q86YQ8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPNE8Q86YQ8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
CPNE8Q86YQ8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.39■■□□□ 1.66
CPNE8Q86YQ8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CPNE8Q86YQ8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CPNE8Q86YQ8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.37■■□□□ 1.65
CPNE8Q86YQ8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CPNE8Q86YQ8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.37■■□□□ 1.65
CPNE8Q86YQ8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CPNE8Q86YQ8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CPNE8Q86YQ8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CPNE8Q86YQ8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
CPNE8Q86YQ8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE8Q86YQ8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.35■■□□□ 1.65
CPNE8Q86YQ8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE8Q86YQ8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE8Q86YQ8 AC060814.1-201ENST00000554326 538 ntBASIC25.35■■□□□ 1.65
CPNE8Q86YQ8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CPNE8Q86YQ8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CPNE8Q86YQ8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CPNE8Q86YQ8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.34■■□□□ 1.65
CPNE8Q86YQ8 MIR639-201ENST00000384974 98 ntBASIC25.34■■□□□ 1.65
CPNE8Q86YQ8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.34■■□□□ 1.65
CPNE8Q86YQ8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
CPNE8Q86YQ8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CPNE8Q86YQ8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
CPNE8Q86YQ8 AC126177.7-201ENST00000547904 679 ntBASIC25.31■■□□□ 1.64
CPNE8Q86YQ8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.31■■□□□ 1.64
CPNE8Q86YQ8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.31■■□□□ 1.64
CPNE8Q86YQ8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.3■■□□□ 1.64
CPNE8Q86YQ8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE8Q86YQ8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.3■■□□□ 1.64
CPNE8Q86YQ8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE8Q86YQ8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE8Q86YQ8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPNE8Q86YQ8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPNE8Q86YQ8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.28■■□□□ 1.64
CPNE8Q86YQ8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPNE8Q86YQ8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.28■■□□□ 1.64
CPNE8Q86YQ8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CPNE8Q86YQ8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CPNE8Q86YQ8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPNE8Q86YQ8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.27■■□□□ 1.64
CPNE8Q86YQ8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPNE8Q86YQ8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.26■■□□□ 1.63
CPNE8Q86YQ8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.26■■□□□ 1.63
CPNE8Q86YQ8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPNE8Q86YQ8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CPNE8Q86YQ8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPNE8Q86YQ8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CPNE8Q86YQ8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms