Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.482e-6■■□□□ 12.3
DDX42Q86XP3 BAZ2A-216ENST00000551996 849 ntTSL 511.62□□□□□ -0.552e-6■■□□□ 12.3
DDX42Q86XP3 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.662e-6■■□□□ 12.3
DDX42Q86XP3 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.672e-6■■□□□ 12.3
DDX42Q86XP3 PNCK-205ENST00000411968 557 ntTSL 510.37□□□□□ -0.752e-6■■□□□ 12.3
DDX42Q86XP3 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC10.04□□□□□ -0.82e-6■■□□□ 12.3
DDX42Q86XP3 ANKRD11-215ENST00000568512 294 ntTSL 29.36□□□□□ -0.912e-6■■□□□ 12.3
DDX42Q86XP3 RNF213-205ENST00000558116 3768 ntTSL 29.27□□□□□ -0.932e-6■■□□□ 12.3
DDX42Q86XP3 RNF213-219ENST00000574909 298 ntTSL 38.34□□□□□ -1.072e-6■■□□□ 12.3
DDX42Q86XP3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.092e-6■■□□□ 12.3
DDX42Q86XP3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.35■■□□□ 1.335e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.92■□□□□ 0.625e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18■□□□□ 0.475e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.475e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.085e-6■■□□□ 12.2
DDX42Q86XP3 DNM2-210ENST00000587830 868 ntTSL 511.8□□□□□ -0.525e-6■■□□□ 12.2
DDX42Q86XP3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.86■□□□□ 0.939e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.19■□□□□ 0.829e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.24■□□□□ 0.679e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.6□□□□□ -0.079e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-211ENST00000438462 656 ntTSL 511.87□□□□□ -0.519e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC9.78□□□□□ -0.849e-7■■□□□ 12.1
DDX42Q86XP3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.799e-7■■□□□ 12.1
DDX42Q86XP3 OGT-204ENST00000455587 632 ntTSL 39.1□□□□□ -0.959e-7■■□□□ 12.1
DDX42Q86XP3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.269e-7■■□□□ 12.1
DDX42Q86XP3 OGT-210ENST00000488174 7243 ntTSL 56.62□□□□□ -1.359e-7■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-201ENST00000237724 821 ntTSL 316.41■□□□□ 0.224e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.514e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-207ENST00000478976 575 ntTSL 410.71□□□□□ -0.694e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-204ENST00000474178 539 ntTSL 410.57□□□□□ -0.724e-8■■□□□ 12.1
DDX42Q86XP3 RAB3GAP2-208ENST00000484658 515 ntTSL 47.91□□□□□ -1.144e-8■■□□□ 12.1
DDX42Q86XP3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.38■■□□□ 1.013e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.74■□□□□ 0.913e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-209ENST00000450863 1617 ntTSL 520.54■□□□□ 0.883e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-203ENST00000419177 760 ntTSL 316.94■□□□□ 0.33e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-204ENST00000429018 2036 ntTSL 1 (best)16.65■□□□□ 0.263e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-205ENST00000431105 568 ntTSL 315.24■□□□□ 0.033e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.43e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.473e-10■■□□□ 12
DDX42Q86XP3 GOLGA4-206ENST00000435830 4152 ntTSL 1 (best)10.68□□□□□ -0.73e-10■■□□□ 12
DDX42Q86XP3 HBBP1-201ENST00000433329 439 ntBASIC8.24□□□□□ -1.098e-6■■□□□ 11.9
DDX42Q86XP3 HNRNPU-217ENST00000638952 5678 ntTSL 518.33■□□□□ 0.528e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-228ENST00000640306 2917 ntTSL 518.18■□□□□ 0.58e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-209ENST00000476241 4844 ntTSL 517.12■□□□□ 0.338e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.338e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.298e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-214ENST00000638475 2698 ntTSL 515.93■□□□□ 0.148e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.058e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-229ENST00000640440 871 ntTSL 315.24■□□□□ 0.038e-7■■□□□ 11.8
DDX42Q86XP3 HNRNPU-224ENST00000640056 2045 ntTSL 510.9□□□□□ -0.668e-7■■□□□ 11.8
DDX42Q86XP3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.887e-6■■□□□ 11.7
DDX42Q86XP3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.867e-6■■□□□ 11.7
DDX42Q86XP3 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.17e-6■■□□□ 11.7
DDX42Q86XP3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.417e-6■■□□□ 11.7
DDX42Q86XP3 INTS11-223ENST00000498173 1589 ntTSL 222.48■■□□□ 1.193e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.123e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.98■■□□□ 1.113e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21■□□□□ 0.953e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-220ENST00000493534 896 ntTSL 320.66■□□□□ 0.93e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.6■□□□□ 0.893e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.33■□□□□ 0.853e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-235ENST00000527719 750 ntTSL 519.97■□□□□ 0.793e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-239ENST00000531019 549 ntTSL 419.86■□□□□ 0.773e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-230ENST00000526332 579 ntTSL 419.86■□□□□ 0.773e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-224ENST00000498476 554 ntTSL 419.86■□□□□ 0.773e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-221ENST00000496353 2428 ntTSL 219.68■□□□□ 0.743e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-215ENST00000470679 584 ntTSL 519.66■□□□□ 0.743e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-219ENST00000490853 704 ntTSL 319.62■□□□□ 0.733e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.25■□□□□ 0.673e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-218ENST00000488042 1134 ntTSL 218.67■□□□□ 0.583e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-237ENST00000530031 800 ntTSL 518.38■□□□□ 0.533e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-207ENST00000434694 1056 ntTSL 518.2■□□□□ 0.53e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.73■□□□□ 0.433e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-243ENST00000532772 1618 ntTSL 517.7■□□□□ 0.423e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-232ENST00000526904 551 ntTSL 417.68■□□□□ 0.423e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-201ENST00000323275 2450 ntTSL 1 (best)17.47■□□□□ 0.393e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.4■□□□□ 0.383e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-210ENST00000458452 2571 ntTSL 217.28■□□□□ 0.363e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-233ENST00000527098 2004 ntTSL 216.85■□□□□ 0.293e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-206ENST00000430786 849 ntTSL 516.21■□□□□ 0.193e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-236ENST00000528879 1524 ntTSL 516.02■□□□□ 0.153e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.89■□□□□ 0.133e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-226ENST00000525285 579 ntTSL 415.61■□□□□ 0.093e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.36■□□□□ 0.053e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-227ENST00000525603 738 ntTSL 315.26■□□□□ 0.033e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-229ENST00000526113 591 ntTSL 514.54□□□□□ -0.083e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-244ENST00000532952 773 ntTSL 314.38□□□□□ -0.113e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-231ENST00000526797 659 ntTSL 413.19□□□□□ -0.33e-7■■□□□ 11.7
DDX42Q86XP3 INTS11-246ENST00000534345 485 ntTSL 412.6□□□□□ -0.393e-7■■□□□ 11.7
DDX42Q86XP3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.18□□□□□ -1.746e-7■■□□□ 11.7
DDX42Q86XP3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.732e-9■■□□□ 11.5
DDX42Q86XP3 RTN4-214ENST00000486085 955 ntTSL 38.35□□□□□ -1.078e-7■■□□□ 11.5
DDX42Q86XP3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.258e-7■■□□□ 11.5
DDX42Q86XP3 CPZ-205ENST00000506287 906 ntTSL 322.8■■□□□ 1.245e-6■■□□□ 11.5
DDX42Q86XP3 CPZ-207ENST00000514602 692 ntTSL 222.41■■□□□ 1.185e-6■■□□□ 11.5
DDX42Q86XP3 ZSWIM8-219ENST00000604165 582 ntTSL 522.09■■□□□ 1.135e-6■■□□□ 11.5
DDX42Q86XP3 AKAP8-203ENST00000595416 557 ntTSL 321.92■■□□□ 1.15e-6■■□□□ 11.5
DDX42Q86XP3 CPZ-204ENST00000504070 583 ntTSL 420.38■□□□□ 0.855e-6■■□□□ 11.5
DDX42Q86XP3 AKAP8-205ENST00000599883 860 ntTSL 520.36■□□□□ 0.855e-6■■□□□ 11.5
DDX42Q86XP3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.845e-6■■□□□ 11.5
Retrieved 100 of 2,477 protein–RNA pairs in 389.1 ms