Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NLRC3Q7RTR2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
NLRC3Q7RTR2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC3Q7RTR2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC3Q7RTR2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC3Q7RTR2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC3Q7RTR2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC3Q7RTR2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLRC3Q7RTR2 MIR219A2-201ENST00000608502 1504 ntBASIC20.99■□□□□ 0.95
NLRC3Q7RTR2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLRC3Q7RTR2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.97■□□□□ 0.95
NLRC3Q7RTR2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC3Q7RTR2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NLRC3Q7RTR2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC3Q7RTR2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC3Q7RTR2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC3Q7RTR2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLRC3Q7RTR2 AC092803.2-201ENST00000564287 1899 ntBASIC20.96■□□□□ 0.95
NLRC3Q7RTR2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NLRC3Q7RTR2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC3Q7RTR2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC3Q7RTR2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NLRC3Q7RTR2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.95■□□□□ 0.95
NLRC3Q7RTR2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 AC126177.7-201ENST00000547904 679 ntBASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 ERN1-208ENST00000606895 2068 ntBASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NLRC3Q7RTR2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NLRC3Q7RTR2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.93■□□□□ 0.94
NLRC3Q7RTR2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NLRC3Q7RTR2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NLRC3Q7RTR2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.93■□□□□ 0.94
NLRC3Q7RTR2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NLRC3Q7RTR2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NLRC3Q7RTR2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NLRC3Q7RTR2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 HSD17B1P1-201ENST00000590052 955 ntBASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.92■□□□□ 0.94
NLRC3Q7RTR2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.91■□□□□ 0.94
NLRC3Q7RTR2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC3Q7RTR2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC3Q7RTR2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NLRC3Q7RTR2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NLRC3Q7RTR2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.9■□□□□ 0.94
NLRC3Q7RTR2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC3Q7RTR2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.89■□□□□ 0.94
NLRC3Q7RTR2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
NLRC3Q7RTR2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.89■□□□□ 0.94
NLRC3Q7RTR2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.89■□□□□ 0.93
NLRC3Q7RTR2 GPX1-201ENST00000419349 1106 ntBASIC20.88■□□□□ 0.93
NLRC3Q7RTR2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.88■□□□□ 0.93
NLRC3Q7RTR2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.88■□□□□ 0.93
NLRC3Q7RTR2 AC022413.1-201ENST00000624602 984 ntBASIC20.88■□□□□ 0.93
NLRC3Q7RTR2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms