Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 SUF5tG(CCC)O 72 nt6.47□□□□□ -1.37
DDC1Q08949 HGH1YGR187C 1185 nt6.47□□□□□ -1.37
DDC1Q08949 RPP1YHR062C 882 nt6.47□□□□□ -1.37
DDC1Q08949 TPK1YJL164C 1194 nt6.47□□□□□ -1.37
DDC1Q08949 YLR123CYLR123C 330 nt6.47□□□□□ -1.37
DDC1Q08949 YDR015CYDR015C 240 nt6.46□□□□□ -1.38
DDC1Q08949 ERP2YAL007C 648 nt6.46□□□□□ -1.38
DDC1Q08949 ECM14YHR132C 1293 nt6.45□□□□□ -1.38
DDC1Q08949 LCB3YJL134W 1230 nt6.45□□□□□ -1.38
DDC1Q08949 MGM101YJR144W 810 nt6.45□□□□□ -1.38
DDC1Q08949 POX1YGL205W 2247 nt6.45□□□□□ -1.38
DDC1Q08949 CCC2YDR270W 3015 nt6.44□□□□□ -1.38
DDC1Q08949 UTR2YEL040W 1404 nt6.44□□□□□ -1.38
DDC1Q08949 YET3YDL072C 612 nt6.44□□□□□ -1.38
DDC1Q08949 DOT5YIL010W 648 nt6.44□□□□□ -1.38
DDC1Q08949 EMP65YER140W 1671 nt6.44□□□□□ -1.38
DDC1Q08949 RIX7YLL034C 2514 nt6.44□□□□□ -1.38
DDC1Q08949 YPR204WYPR204W 3099 nt6.44□□□□□ -1.38
DDC1Q08949 MLS1YNL117W 1665 nt6.43□□□□□ -1.38
DDC1Q08949 HMS2YJR147W 1077 nt6.43□□□□□ -1.38
DDC1Q08949 MCH1YDL054C 1461 nt6.42□□□□□ -1.38
DDC1Q08949 GYP8YFL027C 1494 nt6.42□□□□□ -1.38
DDC1Q08949 KTR1YOR099W 1182 nt6.42□□□□□ -1.38
DDC1Q08949 UIP4YPL186C 915 nt6.42□□□□□ -1.38
DDC1Q08949 FET4YMR319C 1659 nt6.42□□□□□ -1.38
DDC1Q08949 ILV1YER086W 1731 nt6.42□□□□□ -1.38
DDC1Q08949 CBK1YNL161W 2271 nt6.41□□□□□ -1.38
DDC1Q08949 QCR8YJL166W 285 nt6.41□□□□□ -1.38
DDC1Q08949 COX5AYNL052W 462 nt6.41□□□□□ -1.38
DDC1Q08949 FRE5YOR384W 2085 nt6.4□□□□□ -1.38
DDC1Q08949 ICL1YER065C 1674 nt6.4□□□□□ -1.38
DDC1Q08949 BUD32YGR262C 786 nt6.4□□□□□ -1.38
DDC1Q08949 IES2YNL215W 963 nt6.4□□□□□ -1.38
DDC1Q08949 CAF40YNL288W 1122 nt6.39□□□□□ -1.39
DDC1Q08949 RQC1YDR333C 2172 nt6.38□□□□□ -1.39
DDC1Q08949 POP5YAL033W 522 nt6.38□□□□□ -1.39
DDC1Q08949 RPS5YJR123W 678 nt6.38□□□□□ -1.39
DDC1Q08949 PEX13YLR191W 1161 nt6.38□□□□□ -1.39
DDC1Q08949 JNM1YMR294W 1122 nt6.38□□□□□ -1.39
DDC1Q08949 VMA2YBR127C 1554 nt6.38□□□□□ -1.39
DDC1Q08949 SES1YDR023W 1389 nt6.37□□□□□ -1.39
DDC1Q08949 PYC2YBR218C 3543 nt6.36□□□□□ -1.39
DDC1Q08949 NOG2YNR053C 1461 nt6.36□□□□□ -1.39
DDC1Q08949 EXG1YLR300W 1347 nt6.36□□□□□ -1.39
DDC1Q08949 TMT1YER175C 900 nt6.36□□□□□ -1.39
DDC1Q08949 GCV3YAL044C 513 nt6.36□□□□□ -1.39
DDC1Q08949 MEU1YLR017W 1014 nt6.36□□□□□ -1.39
DDC1Q08949 YMC1YPR058W 924 nt6.36□□□□□ -1.39
DDC1Q08949 SLX5YDL013W 1860 nt6.36□□□□□ -1.39
DDC1Q08949 SKS1YPL026C 1509 nt6.35□□□□□ -1.39
DDC1Q08949 TKL2YBR117C 2046 nt6.35□□□□□ -1.39
DDC1Q08949 YOR200WYOR200W 399 nt6.35□□□□□ -1.39
DDC1Q08949 MKK1YOR231W 1527 nt6.35□□□□□ -1.39
DDC1Q08949 SIT4YDL047W 936 nt6.34□□□□□ -1.39
DDC1Q08949 HSP12YFL014W 330 nt6.34□□□□□ -1.39
DDC1Q08949 TIF2YJL138C 1188 nt6.34□□□□□ -1.39
DDC1Q08949 TIF1YKR059W 1188 nt6.34□□□□□ -1.39
DDC1Q08949 ECM19YLR390W 339 nt6.34□□□□□ -1.39
DDC1Q08949 GPA2YER020W 1350 nt6.33□□□□□ -1.4
DDC1Q08949 ARP3YJR065C 1350 nt6.33□□□□□ -1.4
DDC1Q08949 NMT1YLR195C 1368 nt6.33□□□□□ -1.4
DDC1Q08949 BDF2YDL070W 1917 nt6.33□□□□□ -1.4
DDC1Q08949 YCK1YHR135C 1617 nt6.33□□□□□ -1.4
DDC1Q08949 LDS1YAL018C 978 nt6.33□□□□□ -1.4
DDC1Q08949 SEN34YAR008W 828 nt6.33□□□□□ -1.4
DDC1Q08949 SUR7YML052W 909 nt6.33□□□□□ -1.4
DDC1Q08949 ENV7YPL236C 1095 nt6.33□□□□□ -1.4
DDC1Q08949 YPR160C-AYPR160C-A 285 nt6.33□□□□□ -1.4
DDC1Q08949 YML133CYML133C 4125 nt6.32□□□□□ -1.4
DDC1Q08949 CDC34YDR054C 888 nt6.32□□□□□ -1.4
DDC1Q08949 HRQ1YDR291W 3234 nt6.32□□□□□ -1.4
DDC1Q08949 YTP1YNL237W 1380 nt6.31□□□□□ -1.4
DDC1Q08949 PGM1YKL127W 1713 nt6.31□□□□□ -1.4
DDC1Q08949 DMA1YHR115C 1251 nt6.31□□□□□ -1.4
DDC1Q08949 RRS1YOR294W 612 nt6.31□□□□□ -1.4
DDC1Q08949 SMK1YPR054W 1167 nt6.31□□□□□ -1.4
DDC1Q08949 ECM38YLR299W 1983 nt6.31□□□□□ -1.4
DDC1Q08949 GEF1YJR040W 2340 nt6.3□□□□□ -1.4
DDC1Q08949 YDL129WYDL129W 876 nt6.3□□□□□ -1.4
DDC1Q08949 YDR034W-BYDR034W-B 156 nt6.3□□□□□ -1.4
DDC1Q08949 NHA1YLR138W 2958 nt6.3□□□□□ -1.4
DDC1Q08949 YBL070CYBL070C 321 nt6.3□□□□□ -1.4
DDC1Q08949 RPL21AYBR191W 483 nt6.3□□□□□ -1.4
DDC1Q08949 MDM31YHR194W 1740 nt6.3□□□□□ -1.4
DDC1Q08949 UTP4YDR324C 2331 nt6.3□□□□□ -1.4
DDC1Q08949 MNS1YJR131W 1650 nt6.3□□□□□ -1.4
DDC1Q08949 SKY1YMR216C 2229 nt6.29□□□□□ -1.4
DDC1Q08949 HXT15YDL245C 1704 nt6.29□□□□□ -1.4
DDC1Q08949 YHR070C-AYHR070C-A 411 nt6.29□□□□□ -1.4
DDC1Q08949 HXT16YJR158W 1704 nt6.29□□□□□ -1.4
DDC1Q08949 MRPS16YPL013C 366 nt6.29□□□□□ -1.4
DDC1Q08949 YPL102CYPL102C 303 nt6.29□□□□□ -1.4
DDC1Q08949 ARG81YML099C 2643 nt6.29□□□□□ -1.4
DDC1Q08949 CLN1YMR199W 1641 nt6.28□□□□□ -1.4
DDC1Q08949 WHI2YOR043W 1461 nt6.28□□□□□ -1.4
DDC1Q08949 YEL068CYEL068C 333 nt6.28□□□□□ -1.4
DDC1Q08949 YNL017CYNL017C 339 nt6.28□□□□□ -1.4
DDC1Q08949 YNL042W-BYNL042W-B 258 nt6.28□□□□□ -1.4
DDC1Q08949 CRP1YHR146W 1398 nt6.28□□□□□ -1.4
DDC1Q08949 PDR18YNR070W 4002 nt6.28□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms