Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.34■□□□□ 0.85
COL10A1Q03692 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL10A1Q03692 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.34■□□□□ 0.85
COL10A1Q03692 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL10A1Q03692 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL10A1Q03692 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL10A1Q03692 GPX1-201ENST00000419349 1106 ntBASIC20.33■□□□□ 0.85
COL10A1Q03692 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL10A1Q03692 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.32■□□□□ 0.84
COL10A1Q03692 SMPD5-203ENST00000639008 1464 ntBASIC20.32■□□□□ 0.84
COL10A1Q03692 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL10A1Q03692 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL10A1Q03692 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL10A1Q03692 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL10A1Q03692 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
COL10A1Q03692 AC025884.2-201ENST00000553429 711 ntBASIC20.32■□□□□ 0.84
COL10A1Q03692 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COL10A1Q03692 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.32■□□□□ 0.84
COL10A1Q03692 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL10A1Q03692 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL10A1Q03692 ERN1-208ENST00000606895 2068 ntBASIC20.31■□□□□ 0.84
COL10A1Q03692 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.31■□□□□ 0.84
COL10A1Q03692 ECEL1P2-201ENST00000461596 1295 ntBASIC20.31■□□□□ 0.84
COL10A1Q03692 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL10A1Q03692 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL10A1Q03692 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL10A1Q03692 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL10A1Q03692 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
COL10A1Q03692 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL10A1Q03692 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COL10A1Q03692 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.3■□□□□ 0.84
COL10A1Q03692 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
COL10A1Q03692 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL10A1Q03692 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL10A1Q03692 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL10A1Q03692 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL10A1Q03692 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL10A1Q03692 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL10A1Q03692 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.28■□□□□ 0.84
COL10A1Q03692 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COL10A1Q03692 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL10A1Q03692 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.28■□□□□ 0.84
COL10A1Q03692 MIR3960-201ENST00000583311 91 ntBASIC20.28■□□□□ 0.84
COL10A1Q03692 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.28■□□□□ 0.84
COL10A1Q03692 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COL10A1Q03692 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL10A1Q03692 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL10A1Q03692 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL10A1Q03692 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL10A1Q03692 AC010501.1-201ENST00000606270 1962 ntBASIC20.27■□□□□ 0.84
COL10A1Q03692 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL10A1Q03692 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL10A1Q03692 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.27■□□□□ 0.84
COL10A1Q03692 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.27■□□□□ 0.84
COL10A1Q03692 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL10A1Q03692 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL10A1Q03692 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.26■□□□□ 0.83
COL10A1Q03692 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL10A1Q03692 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.26■□□□□ 0.83
COL10A1Q03692 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.26■□□□□ 0.83
COL10A1Q03692 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL10A1Q03692 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.26■□□□□ 0.83
COL10A1Q03692 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.26■□□□□ 0.83
COL10A1Q03692 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.25■□□□□ 0.83
COL10A1Q03692 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL10A1Q03692 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL10A1Q03692 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL10A1Q03692 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL10A1Q03692 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.25■□□□□ 0.83
COL10A1Q03692 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL10A1Q03692 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL10A1Q03692 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL10A1Q03692 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL10A1Q03692 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL10A1Q03692 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL10A1Q03692 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.24■□□□□ 0.83
COL10A1Q03692 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL10A1Q03692 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL10A1Q03692 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL10A1Q03692 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL10A1Q03692 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.23■□□□□ 0.83
COL10A1Q03692 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.23■□□□□ 0.83
COL10A1Q03692 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.23■□□□□ 0.83
COL10A1Q03692 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL10A1Q03692 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL10A1Q03692 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL10A1Q03692 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.22■□□□□ 0.83
COL10A1Q03692 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.22■□□□□ 0.83
COL10A1Q03692 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL10A1Q03692 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL10A1Q03692 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL10A1Q03692 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL10A1Q03692 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL10A1Q03692 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.21■□□□□ 0.83
COL10A1Q03692 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL10A1Q03692 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL10A1Q03692 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
COL10A1Q03692 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL10A1Q03692 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL10A1Q03692 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms