Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MMP8P22894 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MMP8P22894 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
MMP8P22894 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
MMP8P22894 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
MMP8P22894 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
MMP8P22894 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
MMP8P22894 MIR3960-201ENST00000583311 91 ntBASIC25.58■■□□□ 1.69
MMP8P22894 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
MMP8P22894 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.57■■□□□ 1.68
MMP8P22894 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
MMP8P22894 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
MMP8P22894 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
MMP8P22894 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.56■■□□□ 1.68
MMP8P22894 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
MMP8P22894 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
MMP8P22894 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.56■■□□□ 1.68
MMP8P22894 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MMP8P22894 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.55■■□□□ 1.68
MMP8P22894 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.55■■□□□ 1.68
MMP8P22894 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MMP8P22894 AC096887.2-201ENST00000623443 1957 ntBASIC25.55■■□□□ 1.68
MMP8P22894 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
MMP8P22894 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
MMP8P22894 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP8P22894 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.54■■□□□ 1.68
MMP8P22894 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
MMP8P22894 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
MMP8P22894 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
MMP8P22894 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.53■■□□□ 1.68
MMP8P22894 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.52■■□□□ 1.68
MMP8P22894 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MMP8P22894 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.52■■□□□ 1.68
MMP8P22894 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MMP8P22894 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.52■■□□□ 1.68
MMP8P22894 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.51■■□□□ 1.67
MMP8P22894 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.51■■□□□ 1.67
MMP8P22894 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.51■■□□□ 1.67
MMP8P22894 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.51■■□□□ 1.67
MMP8P22894 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.51■■□□□ 1.67
MMP8P22894 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.5■■□□□ 1.67
MMP8P22894 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
MMP8P22894 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
MMP8P22894 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.5■■□□□ 1.67
MMP8P22894 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MMP8P22894 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
MMP8P22894 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
MMP8P22894 RP9P-202ENST00000450133 1212 ntBASIC25.49■■□□□ 1.67
MMP8P22894 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MMP8P22894 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
MMP8P22894 AC020928.2-201ENST00000588717 2197 ntBASIC25.49■■□□□ 1.67
MMP8P22894 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
MMP8P22894 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.48■■□□□ 1.67
MMP8P22894 AC007029.1-201ENST00000604183 313 ntBASIC25.48■■□□□ 1.67
MMP8P22894 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
MMP8P22894 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.48■■□□□ 1.67
MMP8P22894 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
MMP8P22894 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MMP8P22894 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MMP8P22894 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.47■■□□□ 1.67
MMP8P22894 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.47■■□□□ 1.67
MMP8P22894 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MMP8P22894 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MMP8P22894 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MMP8P22894 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MMP8P22894 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
MMP8P22894 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
MMP8P22894 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.46■■□□□ 1.67
MMP8P22894 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
MMP8P22894 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MMP8P22894 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MMP8P22894 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.46■■□□□ 1.67
MMP8P22894 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
MMP8P22894 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP8P22894 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP8P22894 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP8P22894 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
MMP8P22894 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MMP8P22894 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
MMP8P22894 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
MMP8P22894 AC093536.1-201ENST00000569153 554 ntBASIC25.44■■□□□ 1.66
MMP8P22894 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.44■■□□□ 1.66
MMP8P22894 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MMP8P22894 RNF126P1-201ENST00000567452 1320 ntBASIC25.43■■□□□ 1.66
MMP8P22894 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
MMP8P22894 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MMP8P22894 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MMP8P22894 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.42■■□□□ 1.66
MMP8P22894 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MMP8P22894 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
MMP8P22894 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.42■■□□□ 1.66
MMP8P22894 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
MMP8P22894 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MMP8P22894 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
MMP8P22894 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
MMP8P22894 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
MMP8P22894 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MMP8P22894 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.4■■□□□ 1.66
MMP8P22894 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MMP8P22894 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms