Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
CAPN1P07384 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CAPN1P07384 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.7■■□□□ 1.38
CAPN1P07384 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CAPN1P07384 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CAPN1P07384 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CAPN1P07384 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CAPN1P07384 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.69■■□□□ 1.38
CAPN1P07384 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CAPN1P07384 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.69■■□□□ 1.38
CAPN1P07384 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CAPN1P07384 AC020928.2-201ENST00000588717 2197 ntBASIC23.68■■□□□ 1.38
CAPN1P07384 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CAPN1P07384 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CAPN1P07384 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CAPN1P07384 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CAPN1P07384 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CAPN1P07384 ECEL1P2-201ENST00000461596 1295 ntBASIC23.67■■□□□ 1.38
CAPN1P07384 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CAPN1P07384 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CAPN1P07384 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CAPN1P07384 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CAPN1P07384 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CAPN1P07384 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CAPN1P07384 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CAPN1P07384 AL157400.5-201ENST00000507624 621 ntBASIC23.66■■□□□ 1.38
CAPN1P07384 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.66■■□□□ 1.38
CAPN1P07384 AC126177.7-201ENST00000547904 679 ntBASIC23.66■■□□□ 1.38
CAPN1P07384 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.66■■□□□ 1.38
CAPN1P07384 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CAPN1P07384 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CAPN1P07384 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CAPN1P07384 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CAPN1P07384 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.65■■□□□ 1.38
CAPN1P07384 U85056.1-201ENST00000616429 682 ntBASIC23.65■■□□□ 1.38
CAPN1P07384 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CAPN1P07384 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CAPN1P07384 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CAPN1P07384 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CAPN1P07384 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CAPN1P07384 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.64■■□□□ 1.38
CAPN1P07384 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.64■■□□□ 1.38
CAPN1P07384 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
CAPN1P07384 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CAPN1P07384 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.64■■□□□ 1.37
CAPN1P07384 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CAPN1P07384 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CAPN1P07384 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.63■■□□□ 1.37
CAPN1P07384 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CAPN1P07384 AC135731.1-201ENST00000569415 2548 ntBASIC23.63■■□□□ 1.37
CAPN1P07384 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CAPN1P07384 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CAPN1P07384 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CAPN1P07384 AL359258.2-201ENST00000564063 1566 ntBASIC23.62■■□□□ 1.37
CAPN1P07384 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CAPN1P07384 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CAPN1P07384 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CAPN1P07384 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CAPN1P07384 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.61■■□□□ 1.37
CAPN1P07384 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CAPN1P07384 ERN1-208ENST00000606895 2068 ntBASIC23.61■■□□□ 1.37
CAPN1P07384 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CAPN1P07384 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
CAPN1P07384 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.61■■□□□ 1.37
CAPN1P07384 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.6■■□□□ 1.37
CAPN1P07384 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CAPN1P07384 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CAPN1P07384 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.59■■□□□ 1.37
CAPN1P07384 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.59■■□□□ 1.37
CAPN1P07384 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CAPN1P07384 AC012354.3-201ENST00000623734 483 ntBASIC23.59■■□□□ 1.37
CAPN1P07384 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CAPN1P07384 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CAPN1P07384 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CAPN1P07384 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CAPN1P07384 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CAPN1P07384 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
CAPN1P07384 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CAPN1P07384 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CAPN1P07384 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CAPN1P07384 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CAPN1P07384 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.57■■□□□ 1.36
CAPN1P07384 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CAPN1P07384 AC010501.1-201ENST00000606270 1962 ntBASIC23.57■■□□□ 1.36
CAPN1P07384 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
CAPN1P07384 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CAPN1P07384 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CAPN1P07384 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.56■■□□□ 1.36
CAPN1P07384 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CAPN1P07384 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CAPN1P07384 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CAPN1P07384 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.56■■□□□ 1.36
CAPN1P07384 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
CAPN1P07384 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.55■■□□□ 1.36
CAPN1P07384 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CAPN1P07384 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CAPN1P07384 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CAPN1P07384 AL359504.2-201ENST00000605506 1601 ntBASIC23.55■■□□□ 1.36
CAPN1P07384 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.54■■□□□ 1.36
CAPN1P07384 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms