Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF254O75437 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF254O75437 AL359258.2-201ENST00000564063 1566 ntBASIC21.32■■□□□ 1
ZNF254O75437 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF254O75437 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF254O75437 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ZNF254O75437 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ZNF254O75437 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.32■■□□□ 1
ZNF254O75437 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.32■■□□□ 1
ZNF254O75437 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.32■■□□□ 1
ZNF254O75437 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.31■■□□□ 1
ZNF254O75437 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF254O75437 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF254O75437 HLA-V-202ENST00000446817 847 ntBASIC21.31■■□□□ 1
ZNF254O75437 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF254O75437 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.3■■□□□ 1
ZNF254O75437 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF254O75437 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.3■■□□□ 1
ZNF254O75437 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF254O75437 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF254O75437 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF254O75437 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF254O75437 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF254O75437 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF254O75437 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ZNF254O75437 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.28■■□□□ 1
ZNF254O75437 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF254O75437 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF254O75437 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF254O75437 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF254O75437 AL359504.2-201ENST00000605506 1601 ntBASIC21.27■■□□□ 1
ZNF254O75437 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ZNF254O75437 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
ZNF254O75437 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.27■■□□□ 1
ZNF254O75437 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF254O75437 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
ZNF254O75437 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZNF254O75437 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF254O75437 AC142381.3-201ENST00000568208 1670 ntBASIC21.26■□□□□ 0.99
ZNF254O75437 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF254O75437 AC126177.7-201ENST00000547904 679 ntBASIC21.26■□□□□ 0.99
ZNF254O75437 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF254O75437 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.26■□□□□ 0.99
ZNF254O75437 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF254O75437 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF254O75437 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF254O75437 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF254O75437 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.24■□□□□ 0.99
ZNF254O75437 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF254O75437 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
ZNF254O75437 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF254O75437 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF254O75437 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF254O75437 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
ZNF254O75437 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF254O75437 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF254O75437 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
ZNF254O75437 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF254O75437 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ZNF254O75437 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF254O75437 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF254O75437 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF254O75437 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
ZNF254O75437 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF254O75437 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF254O75437 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF254O75437 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF254O75437 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF254O75437 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZNF254O75437 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNF254O75437 CR559946.2-201ENST00000623684 991 ntBASIC21.21■□□□□ 0.99
ZNF254O75437 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNF254O75437 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF254O75437 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZNF254O75437 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF254O75437 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF254O75437 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF254O75437 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF254O75437 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF254O75437 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ZNF254O75437 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF254O75437 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF254O75437 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF254O75437 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ZNF254O75437 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF254O75437 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ZNF254O75437 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF254O75437 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF254O75437 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ZNF254O75437 AC096887.2-201ENST00000623443 1957 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms