Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC28A2O43868 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC28A2O43868 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC28A2O43868 GUSBP5-201ENST00000418136 578 ntBASIC23.18■■□□□ 1.3
SLC28A2O43868 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.18■■□□□ 1.3
SLC28A2O43868 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SLC28A2O43868 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SLC28A2O43868 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC28A2O43868 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC28A2O43868 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.17■■□□□ 1.3
SLC28A2O43868 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SLC28A2O43868 AL449106.1-201ENST00000608517 1980 ntBASIC23.16■■□□□ 1.3
SLC28A2O43868 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC28A2O43868 AC009831.1-201ENST00000580420 1582 ntBASIC23.16■■□□□ 1.3
SLC28A2O43868 AC010980.1-201ENST00000587192 1142 ntBASIC23.16■■□□□ 1.3
SLC28A2O43868 AC007029.1-201ENST00000604183 313 ntBASIC23.16■■□□□ 1.3
SLC28A2O43868 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC28A2O43868 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC28A2O43868 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC28A2O43868 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC28A2O43868 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC28A2O43868 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC28A2O43868 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC28A2O43868 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC28A2O43868 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.14■■□□□ 1.3
SLC28A2O43868 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC28A2O43868 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC28A2O43868 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC28A2O43868 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC28A2O43868 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC28A2O43868 YBX1P4-201ENST00000392794 808 ntBASIC23.14■■□□□ 1.29
SLC28A2O43868 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC28A2O43868 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC28A2O43868 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SLC28A2O43868 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC28A2O43868 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC28A2O43868 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC28A2O43868 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.13■■□□□ 1.29
SLC28A2O43868 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC28A2O43868 AP004609.3-201ENST00000610705 1884 ntBASIC23.13■■□□□ 1.29
SLC28A2O43868 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC28A2O43868 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC28A2O43868 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC28A2O43868 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC28A2O43868 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC28A2O43868 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC28A2O43868 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC28A2O43868 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC28A2O43868 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC28A2O43868 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC28A2O43868 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC28A2O43868 AC025884.2-201ENST00000553429 711 ntBASIC23.11■■□□□ 1.29
SLC28A2O43868 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC28A2O43868 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC28A2O43868 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC28A2O43868 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC28A2O43868 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC28A2O43868 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC28A2O43868 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC28A2O43868 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC28A2O43868 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC28A2O43868 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC28A2O43868 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.09■■□□□ 1.29
SLC28A2O43868 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.09■■□□□ 1.29
SLC28A2O43868 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
SLC28A2O43868 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC28A2O43868 AC074183.2-201ENST00000623112 922 ntBASIC23.09■■□□□ 1.29
SLC28A2O43868 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
SLC28A2O43868 AC091060.1-201ENST00000623524 1766 ntBASIC23.09■■□□□ 1.29
SLC28A2O43868 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC28A2O43868 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC28A2O43868 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC28A2O43868 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SLC28A2O43868 AL356441.2-201ENST00000443009 864 ntBASIC23.08■■□□□ 1.29
SLC28A2O43868 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC28A2O43868 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
SLC28A2O43868 WHAMMP3-201ENST00000611636 1609 ntBASIC23.08■■□□□ 1.28
SLC28A2O43868 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.08■■□□□ 1.28
SLC28A2O43868 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.07■■□□□ 1.28
SLC28A2O43868 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC28A2O43868 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SLC28A2O43868 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC28A2O43868 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SLC28A2O43868 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC28A2O43868 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC28A2O43868 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SLC28A2O43868 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC28A2O43868 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC28A2O43868 AC139795.1-202ENST00000500444 432 ntBASIC23.05■■□□□ 1.28
SLC28A2O43868 AL157400.5-201ENST00000507624 621 ntBASIC23.05■■□□□ 1.28
SLC28A2O43868 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.05■■□□□ 1.28
SLC28A2O43868 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
SLC28A2O43868 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC28A2O43868 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC28A2O43868 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SLC28A2O43868 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SLC28A2O43868 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC28A2O43868 DUX4L9-201ENST00000449051 1259 ntBASIC23.03■■□□□ 1.28
SLC28A2O43868 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC28A2O43868 AC008406.3-201ENST00000620001 1374 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms