Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 AC138932.3-201ENST00000567634 1902 ntBASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 AC022211.4-201ENST00000625094 2161 ntBASIC18.51■□□□□ 0.55
TRAV34A0A0B4J273 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 AC133561.1-201ENST00000568600 2415 ntBASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV34A0A0B4J273 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 AL139125.2-201ENST00000623134 1869 ntBASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 AC110285.7-201ENST00000624417 1536 ntBASIC18.49■□□□□ 0.55
TRAV34A0A0B4J273 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV34A0A0B4J273 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRAV34A0A0B4J273 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV34A0A0B4J273 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.46■□□□□ 0.54
TRAV34A0A0B4J273 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.46■□□□□ 0.54
TRAV34A0A0B4J273 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.46■□□□□ 0.54
TRAV34A0A0B4J273 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV34A0A0B4J273 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 SUZ12P1-203ENST00000578195 985 ntBASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV34A0A0B4J273 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV34A0A0B4J273 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV34A0A0B4J273 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV34A0A0B4J273 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV34A0A0B4J273 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV34A0A0B4J273 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV34A0A0B4J273 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRAV34A0A0B4J273 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms