Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
TRBV23-1A0A0A0MS06 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRBV23-1A0A0A0MS06 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
TRBV23-1A0A0A0MS06 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.22■□□□□ 0.83
TRBV23-1A0A0A0MS06 AC007029.1-201ENST00000604183 313 ntBASIC20.22■□□□□ 0.83
TRBV23-1A0A0A0MS06 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV23-1A0A0A0MS06 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
TRBV23-1A0A0A0MS06 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV23-1A0A0A0MS06 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV23-1A0A0A0MS06 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRBV23-1A0A0A0MS06 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV23-1A0A0A0MS06 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV23-1A0A0A0MS06 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV23-1A0A0A0MS06 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV23-1A0A0A0MS06 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRBV23-1A0A0A0MS06 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV23-1A0A0A0MS06 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 RP9P-202ENST00000450133 1212 ntBASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRBV23-1A0A0A0MS06 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV23-1A0A0A0MS06 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRBV23-1A0A0A0MS06 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRBV23-1A0A0A0MS06 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV23-1A0A0A0MS06 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
TRBV23-1A0A0A0MS06 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 ABHD17AP5-201ENST00000580133 923 ntBASIC20.14■□□□□ 0.81
TRBV23-1A0A0A0MS06 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 AC093536.1-201ENST00000569153 554 ntBASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRBV23-1A0A0A0MS06 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV23-1A0A0A0MS06 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRBV23-1A0A0A0MS06 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV23-1A0A0A0MS06 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV23-1A0A0A0MS06 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.12■□□□□ 0.81
TRBV23-1A0A0A0MS06 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms