Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.76■□□□□ 0.91
DDX49Q9Y6V7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 LINC00304-203ENST00000565008 1864 ntBASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 AL024508.2-201ENST00000607749 1894 ntBASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDX49Q9Y6V7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 AC079776.4-201ENST00000511039 504 ntBASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 AF238378.1-201ENST00000526806 358 ntBASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 BNIP3P18-201ENST00000593976 575 ntBASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 TP73-AS1-207ENST00000624167 988 ntBASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.74■□□□□ 0.91
DDX49Q9Y6V7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX49Q9Y6V7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX49Q9Y6V7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms