Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 IGHV3-22-201ENST00000520721 359 ntBASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 AC006557.2-201ENST00000592985 1240 ntBASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 AL589182.2-201ENST00000619332 1049 ntBASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL4A3BPQ9Y5P4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 AL671883.3-201ENST00000603274 991 ntBASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL4A3BPQ9Y5P4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 KRT18P27-201ENST00000427733 1299 ntBASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 AC106730.1-201ENST00000566722 1090 ntBASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 PRORSD1P-202ENST00000563365 2154 ntBASIC19.27■□□□□ 0.68
COL4A3BPQ9Y5P4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.27■□□□□ 0.67
COL4A3BPQ9Y5P4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.27■□□□□ 0.67
COL4A3BPQ9Y5P4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.27■□□□□ 0.67
COL4A3BPQ9Y5P4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
COL4A3BPQ9Y5P4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.27■□□□□ 0.67
COL4A3BPQ9Y5P4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL4A3BPQ9Y5P4 AL135999.2-201ENST00000622438 1686 ntBASIC19.27■□□□□ 0.67
COL4A3BPQ9Y5P4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 NCF1C-201ENST00000438382 1427 ntBASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL4A3BPQ9Y5P4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms