Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC010460.3-201ENST00000511359 1579 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 CICP6-201ENST00000457191 2729 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 COX5BP2-201ENST00000392354 334 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 SPDYE21P-201ENST00000413323 827 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC004832.2-201ENST00000426397 482 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 MIR3687-2-201ENST00000577708 61 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 MIR3687-1-201ENST00000614492 61 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC055717.3-201ENST00000622967 595 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC005593.1-201ENST00000624894 515 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 AC093010.1-201ENST00000473625 1624 ntBASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA3Q9Y5H0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 AL139424.1-201ENST00000607572 797 ntBASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA3Q9Y5H0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 AC073621.1-201ENST00000392730 636 ntBASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA3Q9Y5H0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms