Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 ELL2P1-201ENST00000413990 1906 ntBASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA9Q9Y5G4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 AC148477.5-201ENST00000625164 1645 ntBASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 AC004790.2-201ENST00000623588 572 ntBASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA9Q9Y5G4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 GPR89P-201ENST00000407924 1495 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 MRPL20P1-201ENST00000400819 433 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AC018845.2-201ENST00000568326 409 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AC116407.2-201ENST00000613639 860 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 GGTLC5P-201ENST00000617623 998 ntBASIC16.11■□□□□ 0.17
PCDHGA9Q9Y5G4 AL513190.1-201ENST00000621254 727 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms