Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB3Q9Y5G1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
PCDHGB3Q9Y5G1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGB3Q9Y5G1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGB3Q9Y5G1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGB3Q9Y5G1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 TSPY19P-201ENST00000418461 509 ntBASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 TSPY18P-201ENST00000441642 509 ntBASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 LINC00265-3P-201ENST00000447588 903 ntBASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 IGHV3-52-201ENST00000519770 353 ntBASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB3Q9Y5G1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC125634.1-201ENST00000438758 1403 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC004870.1-201ENST00000315132 882 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AGGF1P2-201ENST00000426656 2106 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC103564.2-201ENST00000432853 1299 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC122714.2-201ENST00000502787 707 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC104819.1-201ENST00000504587 486 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 LINC01711-201ENST00000598340 967 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AC012313.10-201ENST00000623509 926 ntBASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGB3Q9Y5G1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms