Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 AC009477.1-201ENST00000452936 217 ntBASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 IGHV3-72-202ENST00000621503 303 ntBASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZC3H4Q9UPT8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 HLA-V-204ENST00000476601 1289 ntBASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 SPDYE12P-201ENST00000618416 771 ntBASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ZC3H4Q9UPT8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 API5-211ENST00000534695 560 ntTSL 5 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZC3H4Q9UPT8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 SLC25A6P5-201ENST00000435663 894 ntBASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3H4Q9UPT8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 AIRN-201ENST00000601203 4374 ntBASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZC3H4Q9UPT8 AC007967.4-201ENST00000614700 386 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms