Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 LYSMD4-203ENST00000378904 2122 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AL590787.1-201ENST00000568856 1315 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AL035633.1-201ENST00000406139 838 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AC004461.1-201ENST00000412461 403 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AC002558.1-201ENST00000488906 803 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 SPCS2P1-201ENST00000561636 679 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AC011467.4-201ENST00000594891 528 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AC105339.1-204ENST00000636249 355 ntBASIC17.3■□□□□ 0.36
MBD1Q9UIS9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.3■□□□□ 0.36
MBD1Q9UIS9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AC004835.2-201ENST00000603762 682 ntBASIC17.29■□□□□ 0.36
MBD1Q9UIS9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MBD1Q9UIS9 AC026471.1-201ENST00000564629 3026 ntBASIC17.29■□□□□ 0.36
MBD1Q9UIS9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 AC004449.1-201ENST00000564240 433 ntBASIC17.28■□□□□ 0.36
MBD1Q9UIS9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 AC068137.2-201ENST00000605408 478 ntBASIC17.28■□□□□ 0.36
MBD1Q9UIS9 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MBD1Q9UIS9 AC139713.2-201ENST00000641328 2723 ntBASIC17.27■□□□□ 0.36
MBD1Q9UIS9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD1Q9UIS9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms