Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSFQ9UBX1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSFQ9UBX1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSFQ9UBX1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSFQ9UBX1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTSFQ9UBX1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 MIR1233-2-201ENST00000408138 82 ntBASIC16.21■□□□□ 0.19
CTSFQ9UBX1 MIR1233-1-201ENST00000408722 82 ntBASIC16.21■□□□□ 0.19
CTSFQ9UBX1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 IGLL3P-201ENST00000412472 434 ntBASIC16.21■□□□□ 0.19
CTSFQ9UBX1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 GGTLC5P-201ENST00000617623 998 ntBASIC16.21■□□□□ 0.19
CTSFQ9UBX1 AC139530.3-201ENST00000620344 690 ntBASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSFQ9UBX1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTSFQ9UBX1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTSFQ9UBX1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTSFQ9UBX1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CTSFQ9UBX1 AC099398.1-201ENST00000567919 2776 ntBASIC16.21■□□□□ 0.18
CTSFQ9UBX1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 AC002347.1-201ENST00000569543 541 ntBASIC16.2■□□□□ 0.18
CTSFQ9UBX1 OR7E47P-204ENST00000575924 449 ntBASIC16.2■□□□□ 0.18
CTSFQ9UBX1 AC010327.4-202ENST00000591484 748 ntBASIC16.2■□□□□ 0.18
CTSFQ9UBX1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 GNAS-203ENST00000306120 1878 ntBASIC16.2■□□□□ 0.18
CTSFQ9UBX1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSFQ9UBX1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 AC067852.2-201ENST00000590513 2313 ntBASIC16.19■□□□□ 0.18
CTSFQ9UBX1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.19■□□□□ 0.18
CTSFQ9UBX1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 AC068880.1-201ENST00000507289 2297 ntBASIC16.19■□□□□ 0.18
CTSFQ9UBX1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 YBX2P1-201ENST00000394192 760 ntBASIC16.19■□□□□ 0.18
CTSFQ9UBX1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CTSFQ9UBX1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms