Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 AC092865.5-201ENST00000545435 363 ntBASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 PI4KAP1-204ENST00000612579 1703 ntBASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HMG20BQ9P0W2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 KRT18P13-201ENST00000400056 1290 ntBASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 MRPL20P1-201ENST00000400819 433 ntBASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 BX842568.4-201ENST00000421222 227 ntBASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.94■□□□□ 0.94
HMG20BQ9P0W2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 AC023274.1-201ENST00000418278 595 ntBASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 AC040169.1-201ENST00000565382 521 ntBASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 GGTLC5P-201ENST00000617623 998 ntBASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMG20BQ9P0W2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 PAWRP1-201ENST00000451083 565 ntBASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 AC010654.1-201ENST00000615722 808 ntBASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMG20BQ9P0W2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMG20BQ9P0W2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms