Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 AC069335.1-201ENST00000489972 472 ntBASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HCFC1R1Q9NWW0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 KRT18P32-201ENST00000424695 1287 ntBASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 RARRES2P8-201ENST00000566335 367 ntBASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HCFC1R1Q9NWW0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC1R1Q9NWW0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC1R1Q9NWW0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HCFC1R1Q9NWW0 AC135050.7-201ENST00000624508 2218 ntBASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 SPCS2P4-201ENST00000436160 681 ntBASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 RN7SL589P-201ENST00000481268 310 ntBASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HCFC1R1Q9NWW0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 AC133963.1-201ENST00000504166 1679 ntBASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 GPS2P2-201ENST00000430745 888 ntBASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.75■□□□□ 0.43
HCFC1R1Q9NWW0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms