Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 NKAPP1-205ENST00000585790 367 ntBASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 AL022326.1-202ENST00000641533 845 ntBASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PARPBPQ9NWS1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 RPS2P28-201ENST00000314255 741 ntBASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 AC073648.2-201ENST00000510116 352 ntBASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.46■□□□□ 0.07
PARPBPQ9NWS1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
PARPBPQ9NWS1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.46■□□□□ 0.06
PARPBPQ9NWS1 LYSMD4-203ENST00000378904 2122 ntBASIC15.46■□□□□ 0.06
PARPBPQ9NWS1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PARPBPQ9NWS1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 AC016396.2-201ENST00000562575 1417 ntBASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 AF186996.4-201ENST00000467186 377 ntBASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 AL160237.2-201ENST00000556165 472 ntBASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PARPBPQ9NWS1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms