Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AP002383.4-201ENST00000442518 975 ntBASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AC109464.1-201ENST00000511091 819 ntBASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 RNU6-551P-201ENST00000516661 103 ntBASIC20.2■□□□□ 0.82
RNF216Q9NWF9 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AC097504.2-201ENST00000608088 454 ntBASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF216Q9NWF9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 AC008556.1-201ENST00000610908 2040 ntBASIC20.19■□□□□ 0.82
RNF216Q9NWF9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 AC012615.1-201ENST00000565797 1299 ntBASIC20.19■□□□□ 0.82
RNF216Q9NWF9 RN7SL510P-201ENST00000581311 263 ntBASIC20.19■□□□□ 0.82
RNF216Q9NWF9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 AC079336.6-201ENST00000624836 613 ntBASIC20.19■□□□□ 0.82
RNF216Q9NWF9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
RNF216Q9NWF9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 AP003733.1-201ENST00000491725 852 ntBASIC20.18■□□□□ 0.82
RNF216Q9NWF9 AC117522.2-201ENST00000510049 657 ntBASIC20.18■□□□□ 0.82
RNF216Q9NWF9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF216Q9NWF9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms