Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 AC092053.1-201ENST00000605787 1936 ntBASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 AC108073.2-201ENST00000464002 357 ntBASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 AC145285.3-201ENST00000564603 959 ntBASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM248Q9NWD8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 AC009947.1-201ENST00000444350 727 ntBASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM248Q9NWD8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 FZD10-202ENST00000539839 3282 ntBASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AC087163.2-201ENST00000457299 853 ntBASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AC108751.1-201ENST00000490852 363 ntBASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AC120114.3-201ENST00000611923 658 ntBASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM248Q9NWD8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM248Q9NWD8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms