Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 GRAMD4P3-201ENST00000621665 1669 ntBASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.84■■□□□ 1.25
TRPM3Q9HCF6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 PGF-202ENST00000405431 666 ntTSL 5 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 PRYP6-201ENST00000514804 343 ntBASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 IGHV3-71-201ENST00000523324 359 ntBASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 AC004233.3-201ENST00000607794 1269 ntBASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TRPM3Q9HCF6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRPM3Q9HCF6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.83■■□□□ 1.24
TRPM3Q9HCF6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRPM3Q9HCF6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
TRPM3Q9HCF6 LINC00896-202ENST00000609602 2128 ntBASIC22.83■■□□□ 1.24
TRPM3Q9HCF6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 MIR4492-201ENST00000581627 80 ntBASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 HILS1-202ENST00000545329 423 ntBASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 RNA5-8SN1-201ENST00000610460 153 ntBASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 RNA5-8SN5-202ENST00000612463 153 ntBASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 RNA5-8SN4-201ENST00000613359 153 ntBASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 RNA5-8SN5-201ENST00000619471 153 ntBASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC22.82■■□□□ 1.24
TRPM3Q9HCF6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 ARSEP1-201ENST00000420443 635 ntBASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRPM3Q9HCF6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 AC009407.1-201ENST00000568958 598 ntBASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 AL359881.2-201ENST00000602973 570 ntBASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRPM3Q9HCF6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms