Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.05■□□□□ 0.8
SH2D4AQ9H788 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 AL596442.2-201ENST00000610240 980 ntBASIC20.04■□□□□ 0.8
SH2D4AQ9H788 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH2D4AQ9H788 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 FAM58CP-201ENST00000435741 640 ntBASIC20.03■□□□□ 0.8
SH2D4AQ9H788 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 AC068137.2-201ENST00000605408 478 ntBASIC20.03■□□□□ 0.8
SH2D4AQ9H788 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 LTB4R2-202ENST00000528054 3092 ntBASIC20.03■□□□□ 0.8
SH2D4AQ9H788 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH2D4AQ9H788 AC012317.2-201ENST00000623305 2251 ntBASIC20.02■□□□□ 0.8
SH2D4AQ9H788 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 AL513480.1-201ENST00000451731 511 ntBASIC20.02■□□□□ 0.8
SH2D4AQ9H788 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SH2D4AQ9H788 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SH2D4AQ9H788 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SH2D4AQ9H788 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SH2D4AQ9H788 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.02■□□□□ 0.79
SH2D4AQ9H788 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
SH2D4AQ9H788 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.01■□□□□ 0.79
SH2D4AQ9H788 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4AQ9H788 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4AQ9H788 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms