Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 SAPCD2P3-201ENST00000455031 850 ntBASIC15.4■□□□□ 0.06
NELFAQ9H3P2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 AP005117.1-201ENST00000584346 1413 ntBASIC15.4■□□□□ 0.06
NELFAQ9H3P2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.4■□□□□ 0.06
NELFAQ9H3P2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.06
NELFAQ9H3P2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
NELFAQ9H3P2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.39■□□□□ 0.05
NELFAQ9H3P2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 AC046185.3-201ENST00000623228 1824 ntBASIC15.39■□□□□ 0.05
NELFAQ9H3P2 AC132938.5-201ENST00000624980 1813 ntBASIC15.39■□□□□ 0.05
NELFAQ9H3P2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NELFAQ9H3P2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 RBM17P3-201ENST00000417687 1192 ntBASIC15.38■□□□□ 0.05
NELFAQ9H3P2 FGFR3P6-201ENST00000457012 610 ntBASIC15.38■□□□□ 0.05
NELFAQ9H3P2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
NELFAQ9H3P2 STK25P1-201ENST00000585406 838 ntBASIC15.38■□□□□ 0.05
NELFAQ9H3P2 LINC01711-201ENST00000598340 967 ntBASIC15.38■□□□□ 0.05
NELFAQ9H3P2 AL121894.2-201ENST00000602977 491 ntBASIC15.38■□□□□ 0.05
NELFAQ9H3P2 AL355877.3-201ENST00000622820 899 ntBASIC15.38■□□□□ 0.05
NELFAQ9H3P2 AC073592.5-201ENST00000624854 528 ntBASIC15.38■□□□□ 0.05
NELFAQ9H3P2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms