Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
VPS11Q9H270 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
VPS11Q9H270 AC092053.1-201ENST00000605787 1936 ntBASIC17.39■□□□□ 0.37
VPS11Q9H270 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 AC078925.2-201ENST00000624013 1973 ntBASIC17.39■□□□□ 0.37
VPS11Q9H270 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS11Q9H270 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS11Q9H270 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VPS11Q9H270 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 RNF216P1-203ENST00000404404 2427 ntBASIC17.38■□□□□ 0.37
VPS11Q9H270 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.38■□□□□ 0.37
VPS11Q9H270 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.38■□□□□ 0.37
VPS11Q9H270 AL390719.2-201ENST00000606993 987 ntBASIC17.38■□□□□ 0.37
VPS11Q9H270 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
VPS11Q9H270 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VPS11Q9H270 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VPS11Q9H270 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VPS11Q9H270 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS11Q9H270 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 COX5BP2-201ENST00000392354 334 ntBASIC17.37■□□□□ 0.37
VPS11Q9H270 AC112907.2-201ENST00000448639 330 ntBASIC17.37■□□□□ 0.37
VPS11Q9H270 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.37■□□□□ 0.37
VPS11Q9H270 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS11Q9H270 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS11Q9H270 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS11Q9H270 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.37■□□□□ 0.37
VPS11Q9H270 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.37■□□□□ 0.37
VPS11Q9H270 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VPS11Q9H270 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.37■□□□□ 0.37
VPS11Q9H270 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS11Q9H270 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
VPS11Q9H270 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 Z83836.1-201ENST00000624605 1642 ntBASIC17.36■□□□□ 0.37
VPS11Q9H270 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS11Q9H270 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.36■□□□□ 0.37
VPS11Q9H270 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS11Q9H270 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 TSPY5P-201ENST00000426936 936 ntBASIC17.36■□□□□ 0.37
VPS11Q9H270 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.36■□□□□ 0.37
VPS11Q9H270 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.36■□□□□ 0.37
VPS11Q9H270 HOMER2P1-201ENST00000455653 964 ntBASIC17.36■□□□□ 0.37
VPS11Q9H270 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
VPS11Q9H270 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.36■□□□□ 0.37
VPS11Q9H270 RNF126P1-202ENST00000569893 925 ntBASIC17.36■□□□□ 0.37
VPS11Q9H270 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VPS11Q9H270 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms