Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 MIR3652-201ENST00000579335 131 ntBASIC15.9■□□□□ 0.14
TRIM2Q9C040 AP002414.4-201ENST00000589764 1148 ntBASIC15.9■□□□□ 0.14
TRIM2Q9C040 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 AC012313.10-201ENST00000623509 926 ntBASIC15.9■□□□□ 0.14
TRIM2Q9C040 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 TP73-AS1-210ENST00000637775 1455 ntBASIC15.9■□□□□ 0.14
TRIM2Q9C040 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM2Q9C040 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM2Q9C040 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 AC009336.1-201ENST00000608941 1553 ntBASIC15.89■□□□□ 0.13
TRIM2Q9C040 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 SLC25A1P3-201ENST00000395415 828 ntBASIC15.89■□□□□ 0.13
TRIM2Q9C040 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 TPSP2-201ENST00000561760 610 ntBASIC15.89■□□□□ 0.13
TRIM2Q9C040 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM2Q9C040 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM2Q9C040 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 KRT17P6-201ENST00000453795 1220 ntBASIC15.88■□□□□ 0.13
TRIM2Q9C040 TOB2P1-201ENST00000469761 992 ntBASIC15.88■□□□□ 0.13
TRIM2Q9C040 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 AD001527.2-201ENST00000622994 785 ntBASIC15.88■□□□□ 0.13
TRIM2Q9C040 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM2Q9C040 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM2Q9C040 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms