Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
SSBP4Q9BWG4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SSBP4Q9BWG4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 CRYGFP-201ENST00000418459 633 ntBASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 SLC25A1P2-201ENST00000430693 912 ntBASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AL353719.1-201ENST00000566847 864 ntBASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AP005242.2-201ENST00000580065 1175 ntBASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSBP4Q9BWG4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 AP003041.3-201ENST00000527151 707 ntBASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 AC078925.2-201ENST00000624013 1973 ntBASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP4Q9BWG4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 AP002414.2-201ENST00000591780 3365 ntBASIC13.06□□□□□ -0.32
SSBP4Q9BWG4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms