Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 MYB-242ENST00000618728 3545 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 BAALC-202ENST00000306391 243 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 BAALC-204ENST00000330955 222 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 HES2-202ENST00000377836 507 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC005521.1-201ENST00000393351 872 ntBASIC10.33□□□□□ -0.76
LIMD2Q9BT23 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 TSPY5P-201ENST00000426936 936 ntBASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AL441883.1-201ENST00000566170 1045 ntBASIC10.33□□□□□ -0.76
LIMD2Q9BT23 P4HB-223ENST00000576390 439 ntTSL 4 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 GPR32P1-201ENST00000601788 811 ntBASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AC080080.1-201ENST00000625121 2420 ntBASIC10.33□□□□□ -0.76
LIMD2Q9BT23 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 LINC00167-201ENST00000530583 1419 ntBASIC10.33□□□□□ -0.76
LIMD2Q9BT23 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LIMD2Q9BT23 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 PCDHA1-201ENST00000378133 2726 ntBASIC10.32□□□□□ -0.76
LIMD2Q9BT23 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 AC134043.2-201ENST00000624206 2238 ntBASIC10.32□□□□□ -0.76
LIMD2Q9BT23 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 NME9-203ENST00000383180 2133 ntTSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms