Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC073648.2-201ENST00000510116 352 ntBASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 AL355877.3-201ENST00000622820 899 ntBASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 TP73-AS1-207ENST00000624167 988 ntBASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCGF1Q9BSM1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 AP005117.1-201ENST00000584346 1413 ntBASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.52□□□□□ -0.08
PCGF1Q9BSM1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 AC096633.1-201ENST00000422446 749 ntBASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 SLC25A6P4-201ENST00000586535 553 ntBASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.52□□□□□ -0.09
PCGF1Q9BSM1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 AC106795.1-205ENST00000512851 1056 ntBASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 AL773604.1-201ENST00000617417 272 ntBASIC14.51□□□□□ -0.09
PCGF1Q9BSM1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms