Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.18■□□□□ 0.02
FOXB1Q99853 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.18■□□□□ 0.02
FOXB1Q99853 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
FOXB1Q99853 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FOXB1Q99853 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXB1Q99853 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
FOXB1Q99853 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXB1Q99853 LINC02012-201ENST00000608206 1725 ntBASIC15.17■□□□□ 0.02
FOXB1Q99853 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.17■□□□□ 0.02
FOXB1Q99853 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXB1Q99853 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
FOXB1Q99853 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.17■□□□□ 0.02
FOXB1Q99853 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 AC079781.3-201ENST00000449110 356 ntBASIC15.17■□□□□ 0.02
FOXB1Q99853 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.17■□□□□ 0.02
FOXB1Q99853 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.17■□□□□ 0.02
FOXB1Q99853 AC139887.3-201ENST00000568585 713 ntBASIC15.17■□□□□ 0.02
FOXB1Q99853 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 AC064862.7-201ENST00000604520 867 ntBASIC15.17■□□□□ 0.02
FOXB1Q99853 AC025062.2-201ENST00000605477 670 ntBASIC15.17■□□□□ 0.02
FOXB1Q99853 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
FOXB1Q99853 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXB1Q99853 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.17■□□□□ 0.02
FOXB1Q99853 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FOXB1Q99853 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.17■□□□□ 0.02
FOXB1Q99853 AP001094.4-201ENST00000579008 2176 ntBASIC15.17■□□□□ 0.02
FOXB1Q99853 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXB1Q99853 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXB1Q99853 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXB1Q99853 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXB1Q99853 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.16■□□□□ 0.02
FOXB1Q99853 TPM4P1-201ENST00000436100 807 ntBASIC15.16■□□□□ 0.02
FOXB1Q99853 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 FAM197Y8-203ENST00000450145 560 ntBASIC15.16■□□□□ 0.02
FOXB1Q99853 AL353135.1-201ENST00000606729 504 ntBASIC15.16■□□□□ 0.02
FOXB1Q99853 AL031008.1-201ENST00000619963 541 ntBASIC15.16■□□□□ 0.02
FOXB1Q99853 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXB1Q99853 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
FOXB1Q99853 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
FOXB1Q99853 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.16■□□□□ 0.02
FOXB1Q99853 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FOXB1Q99853 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.16■□□□□ 0.02
FOXB1Q99853 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
FOXB1Q99853 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
FOXB1Q99853 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXB1Q99853 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXB1Q99853 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms